Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492548

Identifier: 116492548

GI number: 116492548

Start: 795647

End: 796228

Strand: Direct

Name: 116492548

Synonym: PEPE_0780

Alternate gene names: NA

Gene position: 795647-796228 (Clockwise)

Preceding gene: 116492547

Following gene: 116492549

Centisome position: 43.42

GC content: 30.76

Gene sequence:

>582_bases
ATGAGTGAAGTTAAACTTACAAGATTTGAAAGAACATCATTAATTAATCAATTTAGAATTATGAAAGCATTGAATATTAG
TGACGATTATGGTGATAAAGAAATTTTCGATAAGAATATAAAGATTTTACATAACGGATTCGAATACTACTATGATGAGG
TTATTTTAGATGCTGGTGGTAGTGTAAGTGTAGAGGTTACGAAAGAAGTCATTGACATTCTAGATGCTTATGATTTTTGT
GCAGCTGTTTACACAGAAGGTTCTATTAAGTTAGACCAGGACCTAGTAAATGAGTTAACAGAGTTTGGATTTGATTTAAA
TGATAGCGATCACATTAGCTACTACAGTATTGCCAACTGGTTACTTAATGATAATAGGTTTACTAATCTTGGTGAATTAA
TGCGTAAGGATATGAACGGAATTGATATTAACGACCATGGGTTTAGTAGAAATATTAATGAAAAACTGAATGTTGCAAAT
CGTTATAAAGATTTTATTCGTGGATCAGATTCTAGTTTTAAAGACGCTACTGTGGATGATATCAGATACATTCTAACTGG
AGTTAACAAGATAACTGAATAA

Upstream 100 bases:

>100_bases
CATCTTATTTTTTAAATTAAATTTCAAAATGTTTTGTTTTTTACGGATTTTTAAAAAATAACCTTTATAATTAAATTATA
AAATATAGGAGGTAGATAAA

Downstream 100 bases:

>100_bases
TTAATTTAACTATTTAAGCCACTCAATTAATACGTTGTGTGGCTTTTTATTGTCCATTAAAGGAGGTGTGGTGATATGCA
ATGGTAGACAAAACTAGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSEVKLTRFERTSLINQFRIMKALNISDDYGDKEIFDKNIKILHNGFEYYYDEVILDAGGSVSVEVTKEVIDILDAYDFC
AAVYTEGSIKLDQDLVNELTEFGFDLNDSDHISYYSIANWLLNDNRFTNLGELMRKDMNGIDINDHGFSRNINEKLNVAN
RYKDFIRGSDSSFKDATVDDIRYILTGVNKITE

Sequences:

>Translated_193_residues
MSEVKLTRFERTSLINQFRIMKALNISDDYGDKEIFDKNIKILHNGFEYYYDEVILDAGGSVSVEVTKEVIDILDAYDFC
AAVYTEGSIKLDQDLVNELTEFGFDLNDSDHISYYSIANWLLNDNRFTNLGELMRKDMNGIDINDHGFSRNINEKLNVAN
RYKDFIRGSDSSFKDATVDDIRYILTGVNKITE
>Mature_192_residues
SEVKLTRFERTSLINQFRIMKALNISDDYGDKEIFDKNIKILHNGFEYYYDEVILDAGGSVSVEVTKEVIDILDAYDFCA
AVYTEGSIKLDQDLVNELTEFGFDLNDSDHISYYSIANWLLNDNRFTNLGELMRKDMNGIDINDHGFSRNINEKLNVANR
YKDFIRGSDSSFKDATVDDIRYILTGVNKITE

Specific function: Unknown

COG id: COG3013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22249; Mature: 22118

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVKLTRFERTSLINQFRIMKALNISDDYGDKEIFDKNIKILHNGFEYYYDEVILDAGG
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCC
SVSVEVTKEVIDILDAYDFCAAVYTEGSIKLDQDLVNELTEFGFDLNDSDHISYYSIANW
CEEEHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHH
LLNDNRFTNLGELMRKDMNGIDINDHGFSRNINEKLNVANRYKDFIRGSDSSFKDATVDD
HHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH
IRYILTGVNKITE
HHHHHHHHHHHCC
>Mature Secondary Structure 
SEVKLTRFERTSLINQFRIMKALNISDDYGDKEIFDKNIKILHNGFEYYYDEVILDAGG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCC
SVSVEVTKEVIDILDAYDFCAAVYTEGSIKLDQDLVNELTEFGFDLNDSDHISYYSIANW
CEEEHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHH
LLNDNRFTNLGELMRKDMNGIDINDHGFSRNINEKLNVANRYKDFIRGSDSSFKDATVDD
HHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH
IRYILTGVNKITE
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA