Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492535

Identifier: 116492535

GI number: 116492535

Start: 791061

End: 791525

Strand: Direct

Name: 116492535

Synonym: PEPE_0767

Alternate gene names: NA

Gene position: 791061-791525 (Clockwise)

Preceding gene: 116492534

Following gene: 116492536

Centisome position: 43.17

GC content: 35.7

Gene sequence:

>465_bases
ATGTTTAGATTAATTGGAAATGTATCAAAGAAAGTATATTACGAATCAGAAAATGATTCCGATTTGAATAAGTGGCGATT
AGATAACTTTCTCAATGATTCTCAAGCAGATGGACATCTAGTCAGCCAATATGACGCACCTGAAGCCATGGTTATTGTAA
AAGTTAAGGCTAACAAATCACGTAGGGAATACCTAAATGATTTACTGGATCAAGGCAAGTTTGAAGAATACCGAAGAATA
ACTATGGAAAATTATAGCCGTGATATTGAAGTTTATGGTCGTGGTAAAGATAAACCAAAACTTATTAAGCGCCGTAAAAT
GGTTGAAAAGCTGTTCAGACAAGGAATTACCAATACCGCTGAAATTGCAAGCAGAGTACATATTGCCAGAAGTACGGTGA
ATTTTGACCTTAGGGCATTGCGCAAAACTTATCCCGAACTAAAACAAAAAAGAGCTAGATCATAG

Upstream 100 bases:

>100_bases
GCTACCGCTATGGCAAGAGTTGGTGTTGAACTTAGTTTTAAAGTAGAGGAAATCTAAAACAACAGTTGAATAAAATATTA
AGAGCGGAGAAAAACAAACG

Downstream 100 bases:

>100_bases
GAGGAAGACAAATGATTGTAATTATCAACGAGGATTATCAAGTAAAGGTAGATAACTATGCTAACTACACCTTGCTCAAG
GCTGTAAGAGACGAATCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MFRLIGNVSKKVYYESENDSDLNKWRLDNFLNDSQADGHLVSQYDAPEAMVIVKVKANKSRREYLNDLLDQGKFEEYRRI
TMENYSRDIEVYGRGKDKPKLIKRRKMVEKLFRQGITNTAEIASRVHIARSTVNFDLRALRKTYPELKQKRARS

Sequences:

>Translated_154_residues
MFRLIGNVSKKVYYESENDSDLNKWRLDNFLNDSQADGHLVSQYDAPEAMVIVKVKANKSRREYLNDLLDQGKFEEYRRI
TMENYSRDIEVYGRGKDKPKLIKRRKMVEKLFRQGITNTAEIASRVHIARSTVNFDLRALRKTYPELKQKRARS
>Mature_154_residues
MFRLIGNVSKKVYYESENDSDLNKWRLDNFLNDSQADGHLVSQYDAPEAMVIVKVKANKSRREYLNDLLDQGKFEEYRRI
TMENYSRDIEVYGRGKDKPKLIKRRKMVEKLFRQGITNTAEIASRVHIARSTVNFDLRALRKTYPELKQKRARS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18236; Mature: 18236

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLIGNVSKKVYYESENDSDLNKWRLDNFLNDSQADGHLVSQYDAPEAMVIVKVKANKS
CCCHHCCCCHHEEECCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEECCCCC
RREYLNDLLDQGKFEEYRRITMENYSRDIEVYGRGKDKPKLIKRRKMVEKLFRQGITNTA
HHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHH
EIASRVHIARSTVNFDLRALRKTYPELKQKRARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFRLIGNVSKKVYYESENDSDLNKWRLDNFLNDSQADGHLVSQYDAPEAMVIVKVKANKS
CCCHHCCCCHHEEECCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEECCCCC
RREYLNDLLDQGKFEEYRRITMENYSRDIEVYGRGKDKPKLIKRRKMVEKLFRQGITNTA
HHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHH
EIASRVHIARSTVNFDLRALRKTYPELKQKRARS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA