| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is 116492532
Identifier: 116492532
GI number: 116492532
Start: 790247
End: 790477
Strand: Direct
Name: 116492532
Synonym: PEPE_0764
Alternate gene names: NA
Gene position: 790247-790477 (Clockwise)
Preceding gene: 116492531
Following gene: 116492533
Centisome position: 43.13
GC content: 36.8
Gene sequence:
>231_bases ATGAAAAATAACAGTTTTGTATTTAACGCAAACATGAAAAAGGTAACTTTGGATAAGAATGGAGCGCAAGTTTTATTGAC TGTAGAAGATACAGATTTCCTTGAGGTGGCTACTCAATTATCTAATACAGCTGGATATGATGTGATTGTCAAAGTTACAC CAGCTCAGACTGAACTAGATACAGAACCACAAGAAGCCGAAGGACAAACGGAGATGTTTAAGCAAGAGTGA
Upstream 100 bases:
>100_bases AGATAGATTAGACGTCTATAACGCTTATCGGAAATTAAGTAGGGAAGAACACAATCACGTGGTAGCAGAAATATTATTAC CATTTTAGGAGGAATTAAGA
Downstream 100 bases:
>100_bases GGTTAATAATCCTATGAAAAAACGTACAGAAATGACAGCAGAGGATATCATCCGTGAATTGTATGGCAATGATTACACTT TGCAAGAATTAGATCGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MKNNSFVFNANMKKVTLDKNGAQVLLTVEDTDFLEVATQLSNTAGYDVIVKVTPAQTELDTEPQEAEGQTEMFKQE
Sequences:
>Translated_76_residues MKNNSFVFNANMKKVTLDKNGAQVLLTVEDTDFLEVATQLSNTAGYDVIVKVTPAQTELDTEPQEAEGQTEMFKQE >Mature_76_residues MKNNSFVFNANMKKVTLDKNGAQVLLTVEDTDFLEVATQLSNTAGYDVIVKVTPAQTELDTEPQEAEGQTEMFKQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8456; Mature: 8456
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNSFVFNANMKKVTLDKNGAQVLLTVEDTDFLEVATQLSNTAGYDVIVKVTPAQTELD CCCCCEEEECCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCC TEPQEAEGQTEMFKQE CCCCCCCCCCCCCCCC >Mature Secondary Structure MKNNSFVFNANMKKVTLDKNGAQVLLTVEDTDFLEVATQLSNTAGYDVIVKVTPAQTELD CCCCCEEEECCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCC TEPQEAEGQTEMFKQE CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA