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The map label for this gene is ynbB [H]

Identifier: 116492505

GI number: 116492505

Start: 774025

End: 775281

Strand: Direct

Name: ynbB [H]

Synonym: PEPE_0737

Alternate gene names: 116492505

Gene position: 774025-775281 (Clockwise)

Preceding gene: 116492504

Following gene: 116492506

Centisome position: 42.24

GC content: 37.79

Gene sequence:

>1257_bases
ATGAATTGGAAAGATGATTTTAAACCGGAAGTAAAAAGAATCATTGAAGAGGTTGAAAAACAAATTCAACCACGACTAAG
TGAGATTGATGATCAAGTAACTTTTAATCAACGGAAAGTATTAGAAGCCTTTCAAAAGGAAAGAATTTCCGAAGAAAATT
TAAATGGAGCGACTGGATACGGTTATAACGATATGGGAAGAGACGCTCTAGACCGGGTTTATGCTGATGTTTTTAAGACA
GAAGATGCGTTGGTCCGGCCACAATTTGTTTCTGGGACTCACACAATTAGTTCGGCCTATTTTGGAATGTTGCGTCCTGG
AGATAAGTTATTATACTTAACGGGGATGCCTTATGATACGATTCAAGAAGTGATTGGCGTCACTGGTAAAGCAGGAATGG
GTTCATTGAAAGACTTTAAAATTGATTTCGATTACGTTCCTTTGTTAGAAAATGGAAAAGTTGATTTTAAAGCTGCCAAG
ACTAAGTTGACGGATCAAGTTAAAGTAGTAGCAATTCAACGTTCAAGAGGTTACTCTAGTCGTTCTAGTTTTACTGTTGA
TGAAATTAAAGTGATGGTAGATCATGTTCGGGAGATTTTACCCAATGCTATTATTTTTGTTGATAATTGCTATGGTGAAT
TTTCAGAAATAGTGGAACCAACTGAAGTAGGCGTTGATGTCATGGTAGGTTCATTAATTAAAAATGCTGGGGGTGGAATC
GCCCATACTGGTGGATACGTTGTTGGAAAGCAAAAATTAATCGAGATGATTGCTAATCGTTTAACTAATGTTGGTGCAGG
TAAGGAAGAGGGAGCTACCCTAGAAAATCTTCGCAGAATGTATCAGGGATTTTTTATGGCCCCTGAGGTTACGGGAGCAG
CAATTAAAGGCGCTATTTTTGAGAGCGCAATTTTAGAAAAGTGTAATTTACAAGTTGATCCTAAATGGAATGATCCACGG
ACGGATTTGATTCAAACAATTAACTTTGGTGAACCAGATTCAATGATTCGCTTTGCTAAGCAAGTACAAAAAAATTCACC
AATTGATTCATATGTTGATCCAGAGCCATCTCAAATGGCTGGATATGAAGATAAAGTTATTATGGCAGCGGGTACCTTTG
TTCAAGGAGCCAGCGTTGAATTTTCTGCTGACGGACCAATTCGCCCACCATATACACTGTATTTACAAGGTGGTCTAACT
TATTCACACGTAAAAATTGCAATCACTAAAGCCGTTGAAGAAACGTTCTTTAACTGA

Upstream 100 bases:

>100_bases
TTTAGAAATAAGATGGATGTAAATTGGTATGACATTATCCAAAATCCACAAGAGCAAGCAAAGATATATCAAAAAATTGA
AAACTGGTTAGGTGTTAAAA

Downstream 100 bases:

>100_bases
TGTTAGAAAATGTAACATCAGCTATTGACGTAGCTATCATTGACTGTTAAACTTAGTTCAATATTAAAGGAGTTATTGGT
ATGAGTGAAAAAGAGCTTCG

Product: cystathionine beta-lyase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNWKDDFKPEVKRIIEEVEKQIQPRLSEIDDQVTFNQRKVLEAFQKERISEENLNGATGYGYNDMGRDALDRVYADVFKT
EDALVRPQFVSGTHTISSAYFGMLRPGDKLLYLTGMPYDTIQEVIGVTGKAGMGSLKDFKIDFDYVPLLENGKVDFKAAK
TKLTDQVKVVAIQRSRGYSSRSSFTVDEIKVMVDHVREILPNAIIFVDNCYGEFSEIVEPTEVGVDVMVGSLIKNAGGGI
AHTGGYVVGKQKLIEMIANRLTNVGAGKEEGATLENLRRMYQGFFMAPEVTGAAIKGAIFESAILEKCNLQVDPKWNDPR
TDLIQTINFGEPDSMIRFAKQVQKNSPIDSYVDPEPSQMAGYEDKVIMAAGTFVQGASVEFSADGPIRPPYTLYLQGGLT
YSHVKIAITKAVEETFFN

Sequences:

>Translated_418_residues
MNWKDDFKPEVKRIIEEVEKQIQPRLSEIDDQVTFNQRKVLEAFQKERISEENLNGATGYGYNDMGRDALDRVYADVFKT
EDALVRPQFVSGTHTISSAYFGMLRPGDKLLYLTGMPYDTIQEVIGVTGKAGMGSLKDFKIDFDYVPLLENGKVDFKAAK
TKLTDQVKVVAIQRSRGYSSRSSFTVDEIKVMVDHVREILPNAIIFVDNCYGEFSEIVEPTEVGVDVMVGSLIKNAGGGI
AHTGGYVVGKQKLIEMIANRLTNVGAGKEEGATLENLRRMYQGFFMAPEVTGAAIKGAIFESAILEKCNLQVDPKWNDPR
TDLIQTINFGEPDSMIRFAKQVQKNSPIDSYVDPEPSQMAGYEDKVIMAAGTFVQGASVEFSADGPIRPPYTLYLQGGLT
YSHVKIAITKAVEETFFN
>Mature_418_residues
MNWKDDFKPEVKRIIEEVEKQIQPRLSEIDDQVTFNQRKVLEAFQKERISEENLNGATGYGYNDMGRDALDRVYADVFKT
EDALVRPQFVSGTHTISSAYFGMLRPGDKLLYLTGMPYDTIQEVIGVTGKAGMGSLKDFKIDFDYVPLLENGKVDFKAAK
TKLTDQVKVVAIQRSRGYSSRSSFTVDEIKVMVDHVREILPNAIIFVDNCYGEFSEIVEPTEVGVDVMVGSLIKNAGGGI
AHTGGYVVGKQKLIEMIANRLTNVGAGKEEGATLENLRRMYQGFFMAPEVTGAAIKGAIFESAILEKCNLQVDPKWNDPR
TDLIQTINFGEPDSMIRFAKQVQKNSPIDSYVDPEPSQMAGYEDKVIMAAGTFVQGASVEFSADGPIRPPYTLYLQGGLT
YSHVKIAITKAVEETFFN

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 46461; Mature: 46461

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWKDDFKPEVKRIIEEVEKQIQPRLSEIDDQVTFNQRKVLEAFQKERISEENLNGATGY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GYNDMGRDALDRVYADVFKTEDALVRPQFVSGTHTISSAYFGMLRPGDKLLYLTGMPYDT
CCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHH
IQEVIGVTGKAGMGSLKDFKIDFDYVPLLENGKVDFKAAKTKLTDQVKVVAIQRSRGYSS
HHHHHCCCCCCCCCCCCCEEECCCEECEECCCCEEHHHHHHHHCCCEEEEEEECCCCCCC
RSSFTVDEIKVMVDHVREILPNAIIFVDNCYGEFSEIVEPTEVGVDVMVGSLIKNAGGGI
CCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
AHTGGYVVGKQKLIEMIANRLTNVGAGKEEGATLENLRRMYQGFFMAPEVTGAAIKGAIF
EECCCEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCEECCCCCCCHHHHHHHH
ESAILEKCNLQVDPKWNDPRTDLIQTINFGEPDSMIRFAKQVQKNSPIDSYVDPEPSQMA
HHHHHHHCCCEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHC
GYEDKVIMAAGTFVQGASVEFSADGPIRPPYTLYLQGGLTYSHVKIAITKAVEETFFN
CCCCCEEEEECCEEECCCEEECCCCCCCCCEEEEEECCCEEEHEEEHHHHHHHHHHCC
>Mature Secondary Structure
MNWKDDFKPEVKRIIEEVEKQIQPRLSEIDDQVTFNQRKVLEAFQKERISEENLNGATGY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GYNDMGRDALDRVYADVFKTEDALVRPQFVSGTHTISSAYFGMLRPGDKLLYLTGMPYDT
CCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHH
IQEVIGVTGKAGMGSLKDFKIDFDYVPLLENGKVDFKAAKTKLTDQVKVVAIQRSRGYSS
HHHHHCCCCCCCCCCCCCEEECCCEECEECCCCEEHHHHHHHHCCCEEEEEEECCCCCCC
RSSFTVDEIKVMVDHVREILPNAIIFVDNCYGEFSEIVEPTEVGVDVMVGSLIKNAGGGI
CCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
AHTGGYVVGKQKLIEMIANRLTNVGAGKEEGATLENLRRMYQGFFMAPEVTGAAIKGAIF
EECCCEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCEECCCCCCCHHHHHHHH
ESAILEKCNLQVDPKWNDPRTDLIQTINFGEPDSMIRFAKQVQKNSPIDSYVDPEPSQMA
HHHHHHHCCCEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHC
GYEDKVIMAAGTFVQGASVEFSADGPIRPPYTLYLQGGLTYSHVKIAITKAVEETFFN
CCCCCEEEEECCEEECCCEEECCCCCCCCCEEEEEECCCEEEHEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]