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The map label for this gene is ybhL [H]

Identifier: 116492455

GI number: 116492455

Start: 727452

End: 728150

Strand: Direct

Name: ybhL [H]

Synonym: PEPE_0687

Alternate gene names: 116492455

Gene position: 727452-728150 (Clockwise)

Preceding gene: 116492454

Following gene: 116492456

Centisome position: 39.7

GC content: 39.2

Gene sequence:

>699_bases
TTGGATCAAAGACCAAATGTTATTAATACAGAAATAGGATTAAATCGATTTCTAACAAAGATGTACGGATGGATGGCAGC
TGCTGTAGCCTTCTCTGGAGTGATTGCTTACCTAGGAACCACAATCTGGCGACCAGCCGTAATGACTTTCCTTTCTCAAG
GAAGAATGAGTATCTGGGTAATTTTTGTTGCTTTGTTCTTGTTTATGATTTTTGGACAAAAGGCGGCCTTGCAGAATCCA
ACGGTTAGTTTCTTAATGCTATTTGCCTTTTCGGCATTCTTTGGAATTACGTTGTCGAGTGTCTTTATGCTTTATAGTAC
CGCTACTATTGCGGGGGCATTTTTCTCAGCAGCATCGGTTTTCATTGTAATGAGTGTGATGGGAGTAACCACAAAGCGTG
ATCTATCAAGGATGGGTAACCATTTAATTGCGGCATTGATTGCGATGGTGGTAGTTTCAGTGATTAATTTATTCTTCCTT
CACAGTTCAGCCGTAACTTTCTTCTTCTCAATTATTGGAATTGTGATTTTTGCGGGTTTGTCAATGTATGATACTGCAAC
TATGAAACGTCTTTACCTGAACTATGGTGACCAAGTTTCTGAGACTGGACTTGCAATCCAAGGGGCATTTAGCCTATATC
TAGACTTTATTAACCTCTTCCAATACTTCTTAACTATTTTTGGATGGAATCGAGACTAA

Upstream 100 bases:

>100_bases
TATTAAGTTTTGATTTGTTTGACTAATTTTGACCTATAACATTAGCCATTTGGGTAGCTTCTTGTTACAATGTGGTAAAT
AATCGAATGGGGGAATTAGA

Downstream 100 bases:

>100_bases
ATAAAAATTTTATAAATACAAATAAACCGAAGGTCAATCTTTTTCACGTTGACCTTCGGTTTTTGGTATCATTAAAGAGG
ATAGAAAACGGAGGAAATTA

Product: integral membrane protein, interacts with FtsH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MDQRPNVINTEIGLNRFLTKMYGWMAAAVAFSGVIAYLGTTIWRPAVMTFLSQGRMSIWVIFVALFLFMIFGQKAALQNP
TVSFLMLFAFSAFFGITLSSVFMLYSTATIAGAFFSAASVFIVMSVMGVTTKRDLSRMGNHLIAALIAMVVVSVINLFFL
HSSAVTFFFSIIGIVIFAGLSMYDTATMKRLYLNYGDQVSETGLAIQGAFSLYLDFINLFQYFLTIFGWNRD

Sequences:

>Translated_232_residues
MDQRPNVINTEIGLNRFLTKMYGWMAAAVAFSGVIAYLGTTIWRPAVMTFLSQGRMSIWVIFVALFLFMIFGQKAALQNP
TVSFLMLFAFSAFFGITLSSVFMLYSTATIAGAFFSAASVFIVMSVMGVTTKRDLSRMGNHLIAALIAMVVVSVINLFFL
HSSAVTFFFSIIGIVIFAGLSMYDTATMKRLYLNYGDQVSETGLAIQGAFSLYLDFINLFQYFLTIFGWNRD
>Mature_232_residues
MDQRPNVINTEIGLNRFLTKMYGWMAAAVAFSGVIAYLGTTIWRPAVMTFLSQGRMSIWVIFVALFLFMIFGQKAALQNP
TVSFLMLFAFSAFFGITLSSVFMLYSTATIAGAFFSAASVFIVMSVMGVTTKRDLSRMGNHLIAALIAMVVVSVINLFFL
HSSAVTFFFSIIGIVIFAGLSMYDTATMKRLYLNYGDQVSETGLAIQGAFSLYLDFINLFQYFLTIFGWNRD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=241, Percent_Identity=36.0995850622407, Blast_Score=129, Evalue=2e-31,
Organism=Drosophila melanogaster, GI45551091, Length=184, Percent_Identity=28.804347826087, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI17647735, Length=184, Percent_Identity=28.804347826087, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24653225, Length=184, Percent_Identity=28.804347826087, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24653221, Length=184, Percent_Identity=28.804347826087, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI24653223, Length=184, Percent_Identity=28.804347826087, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25833; Mature: 25833

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQRPNVINTEIGLNRFLTKMYGWMAAAVAFSGVIAYLGTTIWRPAVMTFLSQGRMSIWV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IFVALFLFMIFGQKAALQNPTVSFLMLFAFSAFFGITLSSVFMLYSTATIAGAFFSAASV
HHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIVMSVMGVTTKRDLSRMGNHLIAALIAMVVVSVINLFFLHSSAVTFFFSIIGIVIFAGL
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SMYDTATMKRLYLNYGDQVSETGLAIQGAFSLYLDFINLFQYFLTIFGWNRD
HHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDQRPNVINTEIGLNRFLTKMYGWMAAAVAFSGVIAYLGTTIWRPAVMTFLSQGRMSIWV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IFVALFLFMIFGQKAALQNPTVSFLMLFAFSAFFGITLSSVFMLYSTATIAGAFFSAASV
HHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIVMSVMGVTTKRDLSRMGNHLIAALIAMVVVSVINLFFLHSSAVTFFFSIIGIVIFAGL
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SMYDTATMKRLYLNYGDQVSETGLAIQGAFSLYLDFINLFQYFLTIFGWNRD
HHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]