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The map label for this gene is 116492394

Identifier: 116492394

GI number: 116492394

Start: 654724

End: 655278

Strand: Direct

Name: 116492394

Synonym: PEPE_0600

Alternate gene names: NA

Gene position: 654724-655278 (Clockwise)

Preceding gene: 116492393

Following gene: 116492395

Centisome position: 35.73

GC content: 41.26

Gene sequence:

>555_bases
ATGTCTCAGTACTCAGAAAGACCAAAAGAGGGCGAGTATATTGCGATAAAAAGCTATAAGCATGATGGGAGTTTGCATCG
GACTTGGCGTGAGACCATGGTCCTGAAAAACAACGAAGATGAGTTTATTGGATGTAATGACCATACGGTGGTCATTGAAG
ATGATGGTCGTCGTTGGGTGACCAGGGAGCCTGCGCTAGTGTATTTTAATAAACATACGTGGTTCAATGTGGTGGCGATG
ATTCGAGACAGTGGGGTTTCGTATTATTGTAATATTGCGTCGCCGTTTGTGTTGGATCGCGAAGCCTTAAAATATGTCGA
TTATGATTTGGACGTAAAGGTTTTTCCAAATGGCGAACGGCGCCTACTTGATATGGACGAATTTGAACAATTCAGTAAAA
AATGGCGCTATCCTCAGGATACAATCAAAATTTTATTGGATAGCGTTCGCGAATTAACGGGTTGGATTGATGAAAAACGT
GGGCCATTTTCGGTCGAGTTTATTAATATTTGGTACAAACGTTATCTAAATATAGCGGAGCGAAATACTCGATAA

Upstream 100 bases:

>100_bases
TTCTGTAGGAAAGCTTAAAGCATGGTGCAAATCTAAGGCTGGTTTTGTTATAATTGAAGAGAAATTCAAAGCTTTCAGCT
GTAGAAAGTGGGCTTAGGCT

Downstream 100 bases:

>100_bases
AAAAAGGAGGTGTGCATAACACTTCCTTTTTGTGTAAAAAATACTAAAATTAGAATGACGATATCATGCGAGGAGTACGT
TATGTTTGAAAAATTTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSQYSERPKEGEYIAIKSYKHDGSLHRTWRETMVLKNNEDEFIGCNDHTVVIEDDGRRWVTREPALVYFNKHTWFNVVAM
IRDSGVSYYCNIASPFVLDREALKYVDYDLDVKVFPNGERRLLDMDEFEQFSKKWRYPQDTIKILLDSVRELTGWIDEKR
GPFSVEFINIWYKRYLNIAERNTR

Sequences:

>Translated_184_residues
MSQYSERPKEGEYIAIKSYKHDGSLHRTWRETMVLKNNEDEFIGCNDHTVVIEDDGRRWVTREPALVYFNKHTWFNVVAM
IRDSGVSYYCNIASPFVLDREALKYVDYDLDVKVFPNGERRLLDMDEFEQFSKKWRYPQDTIKILLDSVRELTGWIDEKR
GPFSVEFINIWYKRYLNIAERNTR
>Mature_183_residues
SQYSERPKEGEYIAIKSYKHDGSLHRTWRETMVLKNNEDEFIGCNDHTVVIEDDGRRWVTREPALVYFNKHTWFNVVAMI
RDSGVSYYCNIASPFVLDREALKYVDYDLDVKVFPNGERRLLDMDEFEQFSKKWRYPQDTIKILLDSVRELTGWIDEKRG
PFSVEFINIWYKRYLNIAERNTR

Specific function: Unknown

COG id: COG3557

COG function: function code J; Uncharacterized domain/protein associated with RNAses G and E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0374 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007295
- InterPro:   IPR016882 [H]

Pfam domain/function: PF04167 DUF402 [H]

EC number: NA

Molecular weight: Translated: 22138; Mature: 22007

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYSERPKEGEYIAIKSYKHDGSLHRTWRETMVLKNNEDEFIGCNDHTVVIEDDGRRWV
CCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHEEEECCCCCEECCCCCEEEEECCCCEEE
TREPALVYFNKHTWFNVVAMIRDSGVSYYCNIASPFVLDREALKYVDYDLDVKVFPNGER
ECCCEEEEEECCCHHHHHEEEECCCCEEEEECCCCEEECHHHHHHCCCCCEEEECCCCCC
RLLDMDEFEQFSKKWRYPQDTIKILLDSVRELTGWIDEKRGPFSVEFINIWYKRYLNIAE
EEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHH
RNTR
CCCC
>Mature Secondary Structure 
SQYSERPKEGEYIAIKSYKHDGSLHRTWRETMVLKNNEDEFIGCNDHTVVIEDDGRRWV
CCCCCCCCCCCEEEEEEECCCCCHHHHHHHHEEEECCCCCEECCCCCEEEEECCCCEEE
TREPALVYFNKHTWFNVVAMIRDSGVSYYCNIASPFVLDREALKYVDYDLDVKVFPNGER
ECCCEEEEEECCCHHHHHEEEECCCCEEEEECCCCEEECHHHHHHCCCCCEEEECCCCCC
RLLDMDEFEQFSKKWRYPQDTIKILLDSVRELTGWIDEKRGPFSVEFINIWYKRYLNIAE
EEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHH
RNTR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566 [H]