Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is epsJ [H]

Identifier: 116492371

GI number: 116492371

Start: 631749

End: 632717

Strand: Direct

Name: epsJ [H]

Synonym: PEPE_0576

Alternate gene names: 116492371

Gene position: 631749-632717 (Clockwise)

Preceding gene: 116492370

Following gene: 116492372

Centisome position: 34.48

GC content: 26.52

Gene sequence:

>969_bases
ATGGCTAAAAAAGTTTCTATTGTTATCCCCATCTACAATGTGGATGGTTTTTTAGAAAGATGTCTAACTTCTGTAAAGGA
ACAGAGCTATACATTTTTTGAAGTCCTATTAATTGATGATGGGTCCACAGATAATTCAAATAAAATTTGCAATGAATTTG
TAAAAAATGATGATAGGTTTATATATATATATCAGAAAAATGCAGGAGTCTCTGCCGCCAGAAATAATGGAATTCGAAAT
GCTTATGGTGATTATATAACATTCGTAGATGGTGATGATTTTCTCGAAGAAAATCACATAGAGAAAATGGTTAATGGTTT
TTTTAAAGCAGAATTAGTTATTTCTGGAAGAAAAAATGTTACTGAAAAAGGTGTTCAAGAAATATTTCAATCTAATGAAG
AGCTATTTTTTAATAGAGGAAATTTAGTTAAACAAATTCTTAAACTGGGTATTGTGTATAGCTTTCCATGGAATAAAATG
TATAAAAAGAAAATTCTAGATGAGAATTCTCTTCACTTTGATGAAAGTTTGGATTATGGAGAAGATTTGGTTTTTAACAT
TCAGTATGCTTTATTAATACATGAAAGTGTTTTGATTACCAGTAGTACGTATAATTACGTTTATAGAGAAAGTAGTGCAA
GTAATCATATGAACGAAGACTCTCTAAGGAAGAGAGTTACAGATCTTTTATCTATTAAGAAAACTATACAAATACTTCCA
AGTAATTTTATGAAAGAAAAAACTTTCTTGAATAAAAGGATAGTTGTGGAAGGTGCAAGATATATTAGATTAATGTATGT
GTATAACTTTTCAGCTACTGACATTAATTTTTACAAAAAAGTGGTAGAAAACTCATATAAATTGATTAAAAATTCATTGA
GCAATAAAGAAAAAATAATATATTATGGTAATTTAAAAATGCCTAAAACAATGAATTTTATATCAAAATTAAAAAACATT
AAAAATTAA

Upstream 100 bases:

>100_bases
TACGCTGGACTATGTTGGATTTTAAAAGTACCCTTTATTAAGGTTATAACTAATTTTATAAGTAAAAATAAACATTAAAT
TGTTTAAAAAGGGTGGGTTA

Downstream 100 bases:

>100_bases
ATCAGTAATCATCTATTTAGTGGGGAATATGGATGTTTGCTCTTTGAGATTAAACTATTAAAATATAGTTTGATTCAAAG
ATACAGAAACTTTAGGAGAA

Product: glycosyltransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MAKKVSIVIPIYNVDGFLERCLTSVKEQSYTFFEVLLIDDGSTDNSNKICNEFVKNDDRFIYIYQKNAGVSAARNNGIRN
AYGDYITFVDGDDFLEENHIEKMVNGFFKAELVISGRKNVTEKGVQEIFQSNEELFFNRGNLVKQILKLGIVYSFPWNKM
YKKKILDENSLHFDESLDYGEDLVFNIQYALLIHESVLITSSTYNYVYRESSASNHMNEDSLRKRVTDLLSIKKTIQILP
SNFMKEKTFLNKRIVVEGARYIRLMYVYNFSATDINFYKKVVENSYKLIKNSLSNKEKIIYYGNLKMPKTMNFISKLKNI
KN

Sequences:

>Translated_322_residues
MAKKVSIVIPIYNVDGFLERCLTSVKEQSYTFFEVLLIDDGSTDNSNKICNEFVKNDDRFIYIYQKNAGVSAARNNGIRN
AYGDYITFVDGDDFLEENHIEKMVNGFFKAELVISGRKNVTEKGVQEIFQSNEELFFNRGNLVKQILKLGIVYSFPWNKM
YKKKILDENSLHFDESLDYGEDLVFNIQYALLIHESVLITSSTYNYVYRESSASNHMNEDSLRKRVTDLLSIKKTIQILP
SNFMKEKTFLNKRIVVEGARYIRLMYVYNFSATDINFYKKVVENSYKLIKNSLSNKEKIIYYGNLKMPKTMNFISKLKNI
KN
>Mature_321_residues
AKKVSIVIPIYNVDGFLERCLTSVKEQSYTFFEVLLIDDGSTDNSNKICNEFVKNDDRFIYIYQKNAGVSAARNNGIRNA
YGDYITFVDGDDFLEENHIEKMVNGFFKAELVISGRKNVTEKGVQEIFQSNEELFFNRGNLVKQILKLGIVYSFPWNKMY
KKKILDENSLHFDESLDYGEDLVFNIQYALLIHESVLITSSTYNYVYRESSASNHMNEDSLRKRVTDLLSIKKTIQILPS
NFMKEKTFLNKRIVVEGARYIRLMYVYNFSATDINFYKKVVENSYKLIKNSLSNKEKIIYYGNLKMPKTMNFISKLKNIK
N

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=218, Percent_Identity=27.9816513761468, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37571; Mature: 37439

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKVSIVIPIYNVDGFLERCLTSVKEQSYTFFEVLLIDDGSTDNSNKICNEFVKNDDRF
CCCEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCE
IYIYQKNAGVSAARNNGIRNAYGDYITFVDGDDFLEENHIEKMVNGFFKAELVISGRKNV
EEEEECCCCCCHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEEECCCCH
TEKGVQEIFQSNEELFFNRGNLVKQILKLGIVYSFPWNKMYKKKILDENSLHFDESLDYG
HHHHHHHHHHCCCCEEEECCHHHHHHHHHCEEEECCCHHHHHHHHCCCCCCCCCCCCCCC
EDLVFNIQYALLIHESVLITSSTYNYVYRESSASNHMNEDSLRKRVTDLLSIKKTIQILP
CCEEEEEEEEEEEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
SNFMKEKTFLNKRIVVEGARYIRLMYVYNFSATDINFYKKVVENSYKLIKNSLSNKEKII
HHHHHHHHHHCCHHEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
YYGNLKMPKTMNFISKLKNIKN
EECCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKKVSIVIPIYNVDGFLERCLTSVKEQSYTFFEVLLIDDGSTDNSNKICNEFVKNDDRF
CCEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCE
IYIYQKNAGVSAARNNGIRNAYGDYITFVDGDDFLEENHIEKMVNGFFKAELVISGRKNV
EEEEECCCCCCHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEEECCCCH
TEKGVQEIFQSNEELFFNRGNLVKQILKLGIVYSFPWNKMYKKKILDENSLHFDESLDYG
HHHHHHHHHHCCCCEEEECCHHHHHHHHHCEEEECCCHHHHHHHHCCCCCCCCCCCCCCC
EDLVFNIQYALLIHESVLITSSTYNYVYRESSASNHMNEDSLRKRVTDLLSIKKTIQILP
CCEEEEEEEEEEEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
SNFMKEKTFLNKRIVVEGARYIRLMYVYNFSATDINFYKKVVENSYKLIKNSLSNKEKII
HHHHHHHHHHCCHHEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
YYGNLKMPKTMNFISKLKNIKN
EECCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]