Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492151

Identifier: 116492151

GI number: 116492151

Start: 395702

End: 396331

Strand: Reverse

Name: 116492151

Synonym: PEPE_0348

Alternate gene names: NA

Gene position: 396331-395702 (Counterclockwise)

Preceding gene: 116492152

Following gene: 116492149

Centisome position: 21.63

GC content: 37.14

Gene sequence:

>630_bases
ATGACGGACGAAAAAATCGAATGGCGTAAAGAAGAAGCTGGTTTTTCACTTAGAAAAAAGCCTCAAATTTTAACCATCCC
TGCTCAAAATTATTTTAGTATCAAAGGTAACGGTGATCCCAATTTACCCGATTTTCAGAAGCGAGTTCAAACACTTTATC
CTTTATCCTATACAATTCGCATGAGTCAAAAAAATGATTGGAATATTCCTAACTTTAAGTTATACACCGTTTATCCGCTC
CAAGGATATTGGGGAATTCAACCTCAATATTTAGATGCGCCAGTCATGCAAAAAGAACATTTCACATATACAATCAGTAT
TAAACAACCTGATTTTGTGACTGATGCAATTGCTGCAGAAGCGTTAGTTCGGGCAAAATCTAAAATCGATGCTGATTTAT
TTGACCAAGTCTTTTTCGACCATCAACCAGAACAATTAGTAGCGCAGATTTTACATGTCGGTGCGTTCGACGATGAACCT
GAAAGCTTCGCCAAATTAGAGCAATTTATCGATGAAGCTGGGTACGTACGCAGTGAAAAAGAACATACCGAAATCTATAT
GAGTGATTTTCGGCGTGTTGAAGAAGCACAGCGTAAAACAATTTTACGAGTAGCCATTCAAAAGAAATAA

Upstream 100 bases:

>100_bases
AGGGAACCATTGTGGTGGTTCAAGATCACCCTAAAAATATCACAATGAAAATCAGTGACGCTAACAAAGCGCTCAACTAA
GTAATTCACGAGGAATTCTT

Downstream 100 bases:

>100_bases
AAAATAGTAACGCGCCTCACTATAAAGTAAGGGACGTTACTATTTTTTAATTTAAGGCATGTCGTTTCCAGCAGCGTAGT
AAATGTCATACCATTCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MTDEKIEWRKEEAGFSLRKKPQILTIPAQNYFSIKGNGDPNLPDFQKRVQTLYPLSYTIRMSQKNDWNIPNFKLYTVYPL
QGYWGIQPQYLDAPVMQKEHFTYTISIKQPDFVTDAIAAEALVRAKSKIDADLFDQVFFDHQPEQLVAQILHVGAFDDEP
ESFAKLEQFIDEAGYVRSEKEHTEIYMSDFRRVEEAQRKTILRVAIQKK

Sequences:

>Translated_209_residues
MTDEKIEWRKEEAGFSLRKKPQILTIPAQNYFSIKGNGDPNLPDFQKRVQTLYPLSYTIRMSQKNDWNIPNFKLYTVYPL
QGYWGIQPQYLDAPVMQKEHFTYTISIKQPDFVTDAIAAEALVRAKSKIDADLFDQVFFDHQPEQLVAQILHVGAFDDEP
ESFAKLEQFIDEAGYVRSEKEHTEIYMSDFRRVEEAQRKTILRVAIQKK
>Mature_208_residues
TDEKIEWRKEEAGFSLRKKPQILTIPAQNYFSIKGNGDPNLPDFQKRVQTLYPLSYTIRMSQKNDWNIPNFKLYTVYPLQ
GYWGIQPQYLDAPVMQKEHFTYTISIKQPDFVTDAIAAEALVRAKSKIDADLFDQVFFDHQPEQLVAQILHVGAFDDEPE
SFAKLEQFIDEAGYVRSEKEHTEIYMSDFRRVEEAQRKTILRVAIQKK

Specific function: Unknown

COG id: COG4832

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24502; Mature: 24371

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEKIEWRKEEAGFSLRKKPQILTIPAQNYFSIKGNGDPNLPDFQKRVQTLYPLSYTIR
CCCCCCHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEE
MSQKNDWNIPNFKLYTVYPLQGYWGIQPQYLDAPVMQKEHFTYTISIKQPDFVTDAIAAE
ECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
ALVRAKSKIDADLFDQVFFDHQPEQLVAQILHVGAFDDEPESFAKLEQFIDEAGYVRSEK
HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCH
EHTEIYMSDFRRVEEAQRKTILRVAIQKK
HHHHHHHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure 
TDEKIEWRKEEAGFSLRKKPQILTIPAQNYFSIKGNGDPNLPDFQKRVQTLYPLSYTIR
CCCCCHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEE
MSQKNDWNIPNFKLYTVYPLQGYWGIQPQYLDAPVMQKEHFTYTISIKQPDFVTDAIAAE
ECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
ALVRAKSKIDADLFDQVFFDHQPEQLVAQILHVGAFDDEPESFAKLEQFIDEAGYVRSEK
HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCH
EHTEIYMSDFRRVEEAQRKTILRVAIQKK
HHHHHHHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA