| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is yieO [C]
Identifier: 116492142
GI number: 116492142
Start: 386865
End: 388286
Strand: Direct
Name: yieO [C]
Synonym: PEPE_0339
Alternate gene names: 116492142
Gene position: 386865-388286 (Clockwise)
Preceding gene: 116492140
Following gene: 116492143
Centisome position: 21.11
GC content: 36.57
Gene sequence:
>1422_bases ATGAATAAGATTCGCCACCAGTTTGATCAATTGGTGCAAGGTGAATATCGTGAGGCCTTCATTCTGATTCTAGGAATGAT TGTGATGCTGATTGGAGAGTTTTCAACCGCATTGGCAGTCACTAAAATTGTGGAAGCATTTGGAAATAATGAAGTTGTCG TACAACTGACGAATATTTTACCTTTGGCTTGGTTAGCTTTAATGTATCCATTGGGCCCAGTTTGGTTGCAAAAAAAGTCA GTCGTTCAGTTGTTAAAGTTATCCTTAGCTATTTTTATGATTGGTTCTTTATTAGTAGGGATAGCTTTTAATATGCCTAT TTTATTACTGGGCCGGATTATTCAAACCACGGGGTGTGGAATTCTATTACCAATGCTTCCGAGTTTAATTGCGACAATTT TACCAGAAAAAAATGTGGGTTTAACCAAAATGGGAGATGTTATGTTAGGAGTAGCGCTAGTTTTAGCCTTATTTCTAACC GGAATATCCTTTTTATTGGGAAACTGGCAATTAATCAATATTTTCTTAATTGTTTTAAGTCTGATCATTTACCACAATGC GTCAAGTATTAAAATCGATTTAGAAATCAGTACATATAATATTGAACGGGTAAACGTAGTTCTTTCGAGTGGCTTTATGG TCTTCATTGGTTGGATAGTTACTTTGGGAGATCAAATCACGAGTAGCTGGTTTAGCTGGGGCTTATTGGTGATAGGTATT GGTCTAATCGCAACTTATCTGTGGCGTGAATTATCTGTACCCAATCCGTTGATTGATTTTAAAGGATTATTCAATGTTCG ATACTTGCGGGCTGTATTACTCCAAGGAATTGGAGATGCTTCCTTAGTAGTGTTAATGATTATCGGGATTTTATATTTGC GTCAAGGATTACATTATTCGGTCATTATTATTGGATTAGCCTTGATGCCATCGATCGTCGTGATGATTTTAATGCATCAT GCTACCAAACGATGGTTTAACAAATTCGAATCGGTCAATAACGTCAGAATGGCGATGAGCTTAATGATGGTGGGATGGGG ATGTCTATCCTTGTTCTCAACCTACTTAAACCTAATTTTATTTATTGTTTTAACTATAATAATTGAAGCTGGGCATGGAT TGTTAATGCAGGTGGGTCAAGAACTCAGCCAAAATCAAAAATCGGCACGTTTAAATAACATGGCCGATATTTTTATGGCT CAGTTCAAATTGATGTCCTCAGGCATGATATTGGCAATTTTGTCAGTTGTTTTGCAGAATGTAACCAACAGTCACACTAG TAACGGATTACCAGGTAAATTATCAACCCTCGTGGGATACCGAGCTACTTTTTCACTTTTCTTTGTGATTACAATTTTAG GTTGGATTATCACGATGTTGGCAGGCAGAAACTTAAACTTAAGCAAACATATTGTAAAATAA
Upstream 100 bases:
>100_bases TGTGCCACAATCGAATTTGAAAAAAGTTTTCGTTGCGCCTTTACTTTACCTTTTTTAATTAATAAAATTATAATTAAGCT TATTTGAGGAGGGCGTATAC
Downstream 100 bases:
>100_bases TTGGGGAATTCAAATGGATTTTAAAGTAGTTTTTAGAAAAACAAAAACGTTTTTAAGTGCTTTACTGAAGCGGTTCAACG ATTCGGAAGTTGTAAATAAT
Product: major facilitator superfamily permease
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: Facilitator Superfamily Permease; Facilitator Superfamily Transporter Permease; Permease Of Facilitator Superfamily Protein; Multidrug Transporter; EmrB/QacA Subfamily Drug Resistance Transporter; Drug Resistance Transporter Emrb/Qaca Family Protein; Multidrug Resistance Protein; Efflux Transporter Protein; Drug Resistance Transporter; Drug Resistance Transporter EmrB/QacA Family Protein; Multidrug Resistance Protein B; Drug-Export Protein
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MNKIRHQFDQLVQGEYREAFILILGMIVMLIGEFSTALAVTKIVEAFGNNEVVVQLTNILPLAWLALMYPLGPVWLQKKS VVQLLKLSLAIFMIGSLLVGIAFNMPILLLGRIIQTTGCGILLPMLPSLIATILPEKNVGLTKMGDVMLGVALVLALFLT GISFLLGNWQLINIFLIVLSLIIYHNASSIKIDLEISTYNIERVNVVLSSGFMVFIGWIVTLGDQITSSWFSWGLLVIGI GLIATYLWRELSVPNPLIDFKGLFNVRYLRAVLLQGIGDASLVVLMIIGILYLRQGLHYSVIIIGLALMPSIVVMILMHH ATKRWFNKFESVNNVRMAMSLMMVGWGCLSLFSTYLNLILFIVLTIIIEAGHGLLMQVGQELSQNQKSARLNNMADIFMA QFKLMSSGMILAILSVVLQNVTNSHTSNGLPGKLSTLVGYRATFSLFFVITILGWIITMLAGRNLNLSKHIVK
Sequences:
>Translated_473_residues MNKIRHQFDQLVQGEYREAFILILGMIVMLIGEFSTALAVTKIVEAFGNNEVVVQLTNILPLAWLALMYPLGPVWLQKKS VVQLLKLSLAIFMIGSLLVGIAFNMPILLLGRIIQTTGCGILLPMLPSLIATILPEKNVGLTKMGDVMLGVALVLALFLT GISFLLGNWQLINIFLIVLSLIIYHNASSIKIDLEISTYNIERVNVVLSSGFMVFIGWIVTLGDQITSSWFSWGLLVIGI GLIATYLWRELSVPNPLIDFKGLFNVRYLRAVLLQGIGDASLVVLMIIGILYLRQGLHYSVIIIGLALMPSIVVMILMHH ATKRWFNKFESVNNVRMAMSLMMVGWGCLSLFSTYLNLILFIVLTIIIEAGHGLLMQVGQELSQNQKSARLNNMADIFMA QFKLMSSGMILAILSVVLQNVTNSHTSNGLPGKLSTLVGYRATFSLFFVITILGWIITMLAGRNLNLSKHIVK >Mature_473_residues MNKIRHQFDQLVQGEYREAFILILGMIVMLIGEFSTALAVTKIVEAFGNNEVVVQLTNILPLAWLALMYPLGPVWLQKKS VVQLLKLSLAIFMIGSLLVGIAFNMPILLLGRIIQTTGCGILLPMLPSLIATILPEKNVGLTKMGDVMLGVALVLALFLT GISFLLGNWQLINIFLIVLSLIIYHNASSIKIDLEISTYNIERVNVVLSSGFMVFIGWIVTLGDQITSSWFSWGLLVIGI GLIATYLWRELSVPNPLIDFKGLFNVRYLRAVLLQGIGDASLVVLMIIGILYLRQGLHYSVIIIGLALMPSIVVMILMHH ATKRWFNKFESVNNVRMAMSLMMVGWGCLSLFSTYLNLILFIVLTIIIEAGHGLLMQVGQELSQNQKSARLNNMADIFMA QFKLMSSGMILAILSVVLQNVTNSHTSNGLPGKLSTLVGYRATFSLFFVITILGWIITMLAGRNLNLSKHIVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52394; Mature: 52394
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIRHQFDQLVQGEYREAFILILGMIVMLIGEFSTALAVTKIVEAFGNNEVVVQLTNIL CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH PLAWLALMYPLGPVWLQKKSVVQLLKLSLAIFMIGSLLVGIAFNMPILLLGRIIQTTGCG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCH ILLPMLPSLIATILPEKNVGLTKMGDVMLGVALVLALFLTGISFLLGNWQLINIFLIVLS HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LIIYHNASSIKIDLEISTYNIERVNVVLSSGFMVFIGWIVTLGDQITSSWFSWGLLVIGI HHHHCCCCCEEEEEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLIATYLWRELSVPNPLIDFKGLFNVRYLRAVLLQGIGDASLVVLMIIGILYLRQGLHYS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHH VIIIGLALMPSIVVMILMHHATKRWFNKFESVNNVRMAMSLMMVGWGCLSLFSTYLNLIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIVLTIIIEAGHGLLMQVGQELSQNQKSARLNNMADIFMAQFKLMSSGMILAILSVVLQN HHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH VTNSHTSNGLPGKLSTLVGYRATFSLFFVITILGWIITMLAGRNLNLSKHIVK HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC >Mature Secondary Structure MNKIRHQFDQLVQGEYREAFILILGMIVMLIGEFSTALAVTKIVEAFGNNEVVVQLTNIL CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH PLAWLALMYPLGPVWLQKKSVVQLLKLSLAIFMIGSLLVGIAFNMPILLLGRIIQTTGCG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCH ILLPMLPSLIATILPEKNVGLTKMGDVMLGVALVLALFLTGISFLLGNWQLINIFLIVLS HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LIIYHNASSIKIDLEISTYNIERVNVVLSSGFMVFIGWIVTLGDQITSSWFSWGLLVIGI HHHHCCCCCEEEEEEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLIATYLWRELSVPNPLIDFKGLFNVRYLRAVLLQGIGDASLVVLMIIGILYLRQGLHYS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHH VIIIGLALMPSIVVMILMHHATKRWFNKFESVNNVRMAMSLMMVGWGCLSLFSTYLNLIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIVLTIIIEAGHGLLMQVGQELSQNQKSARLNNMADIFMAQFKLMSSGMILAILSVVLQN HHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH VTNSHTSNGLPGKLSTLVGYRATFSLFFVITILGWIITMLAGRNLNLSKHIVK HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA