Click here to switch to the map view.

The map label for this gene is 116492137

Identifier: 116492137

GI number: 116492137

Start: 382414

End: 382710

Strand: Reverse

Name: 116492137

Synonym: PEPE_0334

Alternate gene names: NA

Gene position: 382710-382414 (Counterclockwise)

Preceding gene: 116492141

Following gene: 116492136

Centisome position: 20.89

GC content: 38.72

Gene sequence:

>297_bases
ATGAACACAAGTGTCGCAATTCAAGTCCTTCCTATAATGGAAGACGAAAAGAAGCTAGTCGCCGCCGTCGACCAAGCTAT
CAAATATATAAAATCTACCGGTGTTAATTATCAAGTAGGTGCTTTTGAAACCACCCTTGAGGGCGACTATGATCAATTGA
TGGAAATCGTTAAGAATATTACTAAAATAACTGCTGACGCTGGCGCTCCGCAAGTAATGTCTTATGTAAAGATTAATTAC
AAACCAGAAGGACAGGTTCTTGGCATTCATGAAAAAACTGACAAATACCAGCATTAA

Upstream 100 bases:

>100_bases
TAATATTAGAATGATTATTTTCTAACACAAGATGCAGTGAAGCTGGCTTTTTAAGCCGGCTTTTTTTGTACCTAAATTTT
AAAAATGGAGGAATTTATTT

Downstream 100 bases:

>100_bases
TTTTCTACCTATCGTAGCTGTTTTATTAATCTTAGCCATTTGGCAAGCAATTAGTTTCTTCCAGATTATCCCTGAATTCC
TGTTACCATCCCCACTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MNTSVAIQVLPIMEDEKKLVAAVDQAIKYIKSTGVNYQVGAFETTLEGDYDQLMEIVKNITKITADAGAPQVMSYVKINY
KPEGQVLGIHEKTDKYQH

Sequences:

>Translated_98_residues
MNTSVAIQVLPIMEDEKKLVAAVDQAIKYIKSTGVNYQVGAFETTLEGDYDQLMEIVKNITKITADAGAPQVMSYVKINY
KPEGQVLGIHEKTDKYQH
>Mature_98_residues
MNTSVAIQVLPIMEDEKKLVAAVDQAIKYIKSTGVNYQVGAFETTLEGDYDQLMEIVKNITKITADAGAPQVMSYVKINY
KPEGQVLGIHEKTDKYQH

Specific function: Unknown

COG id: COG0011

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0045 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002767
- InterPro:   IPR016198 [H]

Pfam domain/function: PF01910 DUF77 [H]

EC number: NA

Molecular weight: Translated: 10920; Mature: 10920

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSVAIQVLPIMEDEKKLVAAVDQAIKYIKSTGVNYQVGAFETTLEGDYDQLMEIVKNI
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEECCCEEECCCCCHHHHHHHHHHH
TKITADAGAPQVMSYVKINYKPEGQVLGIHEKTDKYQH
HHHHCCCCCHHHHHHEEECCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MNTSVAIQVLPIMEDEKKLVAAVDQAIKYIKSTGVNYQVGAFETTLEGDYDQLMEIVKNI
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEECCCEEECCCCCHHHHHHHHHHH
TKITADAGAPQVMSYVKINYKPEGQVLGIHEKTDKYQH
HHHHCCCCCHHHHHHEEECCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8052128; 11792842 [H]