Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116491962

Identifier: 116491962

GI number: 116491962

Start: 175229

End: 176359

Strand: Reverse

Name: 116491962

Synonym: PEPE_0148

Alternate gene names: NA

Gene position: 176359-175229 (Counterclockwise)

Preceding gene: 116491963

Following gene: 116491959

Centisome position: 9.62

GC content: 41.38

Gene sequence:

>1131_bases
ATGAAGAATACAGTACTAAAATGGATCGAACAACTTAAGGAGCGATTCCATCCGCAACAAGAGGACCATCAGCCTTTTGT
CGATGACGAGCTCTATTTGGGAAGTCGAAGTCGCAAACGTCGTGCTCGCAGAAGAAGTATTAAACGTTTAAGCACCTGGG
TCGCTGGTTTAATTGTCGCTTTCTTATTAATCTTTGGCATTTATCGAGGGATTTCACATTTTAGTTCATCCCACCGAGCA
GCCCGTTTAAATGAAGAAATTGGTCAGTTATATACTGATAATCGTCACGCTGATCTAAAAGATTCGGTAACCCAAACTAA
GCTAGATAAGCTCAAGTCTGATGTTGACAGTTTAAAACATTATAAGAACATCGATTCCTTGCGTGCCAAACAAGTAGCTG
CACAAAATGCTTATGATGTTCGCGCTGATTACAGTCATCTTTTCAATAAACAAACTCGCGTTGCTTTAAACGTGACAACT
AAAAAGGTTGACCATCAGTTGAAAAACTTAAAGCAAAAAAAGGTACCCGCTCAATTTAGAACTAACTATACTAAACAGTT
AAAAGACGTCCGCAAGATTGTCGTTATGGCGGATAAACTTAGCAAACGTTATAAAGTTATTATGAAAGCTCGTAAAAACA
ATCTTTCCGTTGACGTGACTACAGTAGAAAAATTGATTAAGGACATGAGTAAAAACCAAAAATCACAGAAAACAGTTGAT
CAACAAACTAAGTTAATTAGTTTGAAGACGGTCATTAATAAGGAAGATAAACAAGCTGCTAAGGCCGCCAAAGCGGCTGC
GGAAGCCGCTGCACGGGCAGAAGCTATTGCAGCTGCCGAAAGAGCGGCCGCTGAATCTTCCCGGGCTGAATCTGAATCAG
CTTCGAAGGCCGCTTCCAAGGCTGAATCTGAATCTTCTAGTGCAGCTAAAGCATCTTCTGAAGCCGAAGCTAAATCCGAG
TCAGAAGCCGAAGCTGCCGCTGAAGCCCAAGCTAATGCTAACGCCCAGACAAGTACCGATGCATCTGACAGCACTAACGA
TGCAGGTACCACTAATAATACTCAGGCATATTACAACTTTAGTATCAGTGGCACCGATTCTCAAACTAACACTTCAAATA
CCAGTTACTAA

Upstream 100 bases:

>100_bases
ATAAATTTCATCCAAATCTAACCCAAAACCAGTATAATAAACTATAATTATACATATATTATGAGTTATTAAGTAACTAG
TCTCTGGGGGATTTTTGTTT

Downstream 100 bases:

>100_bases
TTTAAAAGAGCTATAACCAAAGGTCGCTCGTCGAATTATCGACTCCCACGTCCGCTTGATTACAGCTCTTTTTTATTTGC
TATTTATCGTGATTTTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKNTVLKWIEQLKERFHPQQEDHQPFVDDELYLGSRSRKRRARRRSIKRLSTWVAGLIVAFLLIFGIYRGISHFSSSHRA
ARLNEEIGQLYTDNRHADLKDSVTQTKLDKLKSDVDSLKHYKNIDSLRAKQVAAQNAYDVRADYSHLFNKQTRVALNVTT
KKVDHQLKNLKQKKVPAQFRTNYTKQLKDVRKIVVMADKLSKRYKVIMKARKNNLSVDVTTVEKLIKDMSKNQKSQKTVD
QQTKLISLKTVINKEDKQAAKAAKAAAEAAARAEAIAAAERAAAESSRAESESASKAASKAESESSSAAKASSEAEAKSE
SEAEAAAEAQANANAQTSTDASDSTNDAGTTNNTQAYYNFSISGTDSQTNTSNTSY

Sequences:

>Translated_376_residues
MKNTVLKWIEQLKERFHPQQEDHQPFVDDELYLGSRSRKRRARRRSIKRLSTWVAGLIVAFLLIFGIYRGISHFSSSHRA
ARLNEEIGQLYTDNRHADLKDSVTQTKLDKLKSDVDSLKHYKNIDSLRAKQVAAQNAYDVRADYSHLFNKQTRVALNVTT
KKVDHQLKNLKQKKVPAQFRTNYTKQLKDVRKIVVMADKLSKRYKVIMKARKNNLSVDVTTVEKLIKDMSKNQKSQKTVD
QQTKLISLKTVINKEDKQAAKAAKAAAEAAARAEAIAAAERAAAESSRAESESASKAASKAESESSSAAKASSEAEAKSE
SEAEAAAEAQANANAQTSTDASDSTNDAGTTNNTQAYYNFSISGTDSQTNTSNTSY
>Mature_376_residues
MKNTVLKWIEQLKERFHPQQEDHQPFVDDELYLGSRSRKRRARRRSIKRLSTWVAGLIVAFLLIFGIYRGISHFSSSHRA
ARLNEEIGQLYTDNRHADLKDSVTQTKLDKLKSDVDSLKHYKNIDSLRAKQVAAQNAYDVRADYSHLFNKQTRVALNVTT
KKVDHQLKNLKQKKVPAQFRTNYTKQLKDVRKIVVMADKLSKRYKVIMKARKNNLSVDVTTVEKLIKDMSKNQKSQKTVD
QQTKLISLKTVINKEDKQAAKAAKAAAEAAARAEAIAAAERAAAESSRAESESASKAASKAESESSSAAKASSEAEAKSE
SEAEAAAEAQANANAQTSTDASDSTNDAGTTNNTQAYYNFSISGTDSQTNTSNTSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41811; Mature: 41811

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTVLKWIEQLKERFHPQQEDHQPFVDDELYLGSRSRKRRARRRSIKRLSTWVAGLIVA
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLLIFGIYRGISHFSSSHRAARLNEEIGQLYTDNRHADLKDSVTQTKLDKLKSDVDSLKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YKNIDSLRAKQVAAQNAYDVRADYSHLFNKQTRVALNVTTKKVDHQLKNLKQKKVPAQFR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHH
TNYTKQLKDVRKIVVMADKLSKRYKVIMKARKNNLSVDVTTVEKLIKDMSKNQKSQKTVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHH
QQTKLISLKTVINKEDKQAAKAAKAAAEAAARAEAIAAAERAAAESSRAESESASKAASK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESESSSAAKASSEAEAKSESEAEAAAEAQANANAQTSTDASDSTNDAGTTNNTQAYYNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
SISGTDSQTNTSNTSY
EEECCCCCCCCCCCCC
>Mature Secondary Structure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EEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA