| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116491962
Identifier: 116491962
GI number: 116491962
Start: 175229
End: 176359
Strand: Reverse
Name: 116491962
Synonym: PEPE_0148
Alternate gene names: NA
Gene position: 176359-175229 (Counterclockwise)
Preceding gene: 116491963
Following gene: 116491959
Centisome position: 9.62
GC content: 41.38
Gene sequence:
>1131_bases ATGAAGAATACAGTACTAAAATGGATCGAACAACTTAAGGAGCGATTCCATCCGCAACAAGAGGACCATCAGCCTTTTGT CGATGACGAGCTCTATTTGGGAAGTCGAAGTCGCAAACGTCGTGCTCGCAGAAGAAGTATTAAACGTTTAAGCACCTGGG TCGCTGGTTTAATTGTCGCTTTCTTATTAATCTTTGGCATTTATCGAGGGATTTCACATTTTAGTTCATCCCACCGAGCA GCCCGTTTAAATGAAGAAATTGGTCAGTTATATACTGATAATCGTCACGCTGATCTAAAAGATTCGGTAACCCAAACTAA GCTAGATAAGCTCAAGTCTGATGTTGACAGTTTAAAACATTATAAGAACATCGATTCCTTGCGTGCCAAACAAGTAGCTG CACAAAATGCTTATGATGTTCGCGCTGATTACAGTCATCTTTTCAATAAACAAACTCGCGTTGCTTTAAACGTGACAACT AAAAAGGTTGACCATCAGTTGAAAAACTTAAAGCAAAAAAAGGTACCCGCTCAATTTAGAACTAACTATACTAAACAGTT AAAAGACGTCCGCAAGATTGTCGTTATGGCGGATAAACTTAGCAAACGTTATAAAGTTATTATGAAAGCTCGTAAAAACA ATCTTTCCGTTGACGTGACTACAGTAGAAAAATTGATTAAGGACATGAGTAAAAACCAAAAATCACAGAAAACAGTTGAT CAACAAACTAAGTTAATTAGTTTGAAGACGGTCATTAATAAGGAAGATAAACAAGCTGCTAAGGCCGCCAAAGCGGCTGC GGAAGCCGCTGCACGGGCAGAAGCTATTGCAGCTGCCGAAAGAGCGGCCGCTGAATCTTCCCGGGCTGAATCTGAATCAG CTTCGAAGGCCGCTTCCAAGGCTGAATCTGAATCTTCTAGTGCAGCTAAAGCATCTTCTGAAGCCGAAGCTAAATCCGAG TCAGAAGCCGAAGCTGCCGCTGAAGCCCAAGCTAATGCTAACGCCCAGACAAGTACCGATGCATCTGACAGCACTAACGA TGCAGGTACCACTAATAATACTCAGGCATATTACAACTTTAGTATCAGTGGCACCGATTCTCAAACTAACACTTCAAATA CCAGTTACTAA
Upstream 100 bases:
>100_bases ATAAATTTCATCCAAATCTAACCCAAAACCAGTATAATAAACTATAATTATACATATATTATGAGTTATTAAGTAACTAG TCTCTGGGGGATTTTTGTTT
Downstream 100 bases:
>100_bases TTTAAAAGAGCTATAACCAAAGGTCGCTCGTCGAATTATCGACTCCCACGTCCGCTTGATTACAGCTCTTTTTTATTTGC TATTTATCGTGATTTTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKNTVLKWIEQLKERFHPQQEDHQPFVDDELYLGSRSRKRRARRRSIKRLSTWVAGLIVAFLLIFGIYRGISHFSSSHRA ARLNEEIGQLYTDNRHADLKDSVTQTKLDKLKSDVDSLKHYKNIDSLRAKQVAAQNAYDVRADYSHLFNKQTRVALNVTT KKVDHQLKNLKQKKVPAQFRTNYTKQLKDVRKIVVMADKLSKRYKVIMKARKNNLSVDVTTVEKLIKDMSKNQKSQKTVD QQTKLISLKTVINKEDKQAAKAAKAAAEAAARAEAIAAAERAAAESSRAESESASKAASKAESESSSAAKASSEAEAKSE SEAEAAAEAQANANAQTSTDASDSTNDAGTTNNTQAYYNFSISGTDSQTNTSNTSY
Sequences:
>Translated_376_residues MKNTVLKWIEQLKERFHPQQEDHQPFVDDELYLGSRSRKRRARRRSIKRLSTWVAGLIVAFLLIFGIYRGISHFSSSHRA ARLNEEIGQLYTDNRHADLKDSVTQTKLDKLKSDVDSLKHYKNIDSLRAKQVAAQNAYDVRADYSHLFNKQTRVALNVTT KKVDHQLKNLKQKKVPAQFRTNYTKQLKDVRKIVVMADKLSKRYKVIMKARKNNLSVDVTTVEKLIKDMSKNQKSQKTVD QQTKLISLKTVINKEDKQAAKAAKAAAEAAARAEAIAAAERAAAESSRAESESASKAASKAESESSSAAKASSEAEAKSE SEAEAAAEAQANANAQTSTDASDSTNDAGTTNNTQAYYNFSISGTDSQTNTSNTSY >Mature_376_residues MKNTVLKWIEQLKERFHPQQEDHQPFVDDELYLGSRSRKRRARRRSIKRLSTWVAGLIVAFLLIFGIYRGISHFSSSHRA ARLNEEIGQLYTDNRHADLKDSVTQTKLDKLKSDVDSLKHYKNIDSLRAKQVAAQNAYDVRADYSHLFNKQTRVALNVTT KKVDHQLKNLKQKKVPAQFRTNYTKQLKDVRKIVVMADKLSKRYKVIMKARKNNLSVDVTTVEKLIKDMSKNQKSQKTVD QQTKLISLKTVINKEDKQAAKAAKAAAEAAARAEAIAAAERAAAESSRAESESASKAASKAESESSSAAKASSEAEAKSE SEAEAAAEAQANANAQTSTDASDSTNDAGTTNNTQAYYNFSISGTDSQTNTSNTSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41811; Mature: 41811
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTVLKWIEQLKERFHPQQEDHQPFVDDELYLGSRSRKRRARRRSIKRLSTWVAGLIVA CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FLLIFGIYRGISHFSSSHRAARLNEEIGQLYTDNRHADLKDSVTQTKLDKLKSDVDSLKH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH YKNIDSLRAKQVAAQNAYDVRADYSHLFNKQTRVALNVTTKKVDHQLKNLKQKKVPAQFR HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHH TNYTKQLKDVRKIVVMADKLSKRYKVIMKARKNNLSVDVTTVEKLIKDMSKNQKSQKTVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHH QQTKLISLKTVINKEDKQAAKAAKAAAEAAARAEAIAAAERAAAESSRAESESASKAASK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AESESSSAAKASSEAEAKSESEAEAAAEAQANANAQTSTDASDSTNDAGTTNNTQAYYNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEE SISGTDSQTNTSNTSY EEECCCCCCCCCCCCC >Mature Secondary Structure MKNTVLKWIEQLKERFHPQQEDHQPFVDDELYLGSRSRKRRARRRSIKRLSTWVAGLIVA CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FLLIFGIYRGISHFSSSHRAARLNEEIGQLYTDNRHADLKDSVTQTKLDKLKSDVDSLKH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH YKNIDSLRAKQVAAQNAYDVRADYSHLFNKQTRVALNVTTKKVDHQLKNLKQKKVPAQFR HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHH TNYTKQLKDVRKIVVMADKLSKRYKVIMKARKNNLSVDVTTVEKLIKDMSKNQKSQKTVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHH QQTKLISLKTVINKEDKQAAKAAKAAAEAAARAEAIAAAERAAAESSRAESESASKAASK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AESESSSAAKASSEAEAKSESEAEAAAEAQANANAQTSTDASDSTNDAGTTNNTQAYYNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEE SISGTDSQTNTSNTSY EEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA