Click here to switch to the map view.

The map label for this gene is yycB [H]

Identifier: 116491953

GI number: 116491953

Start: 164945

End: 166147

Strand: Direct

Name: yycB [H]

Synonym: PEPE_0139

Alternate gene names: 116491953

Gene position: 164945-166147 (Clockwise)

Preceding gene: 116491952

Following gene: 116491955

Centisome position: 9.0

GC content: 42.48

Gene sequence:

>1203_bases
TTGAACTGGAAAAAAGGAACTTTAGGCGCGAGCGGAATGCTCGTCCTCGTTATTTTAATCGGATTGATGTTACGAACACC
AATTACCACGCTACCTCTGATGCTAGGAGATTTGGCTAACAAACTGGAGGTCTCGAAGAGTAGTTTGGGAATCTTAACGA
CTTTGCCACTCATAATGTTTATGTTATTTTCGAGTGTCGCCTCGACCATTTTAAAAAAGTGGGGTTTTAAAAAGTCACTC
CTAGGTACCTTAGCCATCCTATTAGTGGGTTCATTATTACGACTCATCGTTACAATGCCGACGATGATCATCGGAACCAG
TTTGATTGGAATGGGAATTGCTTATTTAAACGTTTATATGCCATCATTTGTTACAGCATATTTCCCTAGCAATATTGGAC
TTTATACCTCGGTTTATACCTTTTCGATGATGTTTGGAGTGGCACTTTTCAACGTTATCACGGCGCCCATCATGGTGTGG
GCCGGGTGGTGGAGCATGCTGATAGTATTAGCGATTACCCCTCTGTTGGCATTAATCATCTGGTTGTTTTTGATGCCTCA
TCTATCAGAAGAAATCCATGAGCCGCAAGTTGAAGTTAAAAAAGAAGCTATGTCCAACGATCAAATCTGGGTGAATAAAA
AAGCATGGGCTTTTCTAATCATGTTTGGGAGCCAATCGATTCTAAATTACACATTCACTGCATGGATGCCATCCTTGATG
GCGTATCACCAAGTCGGATCAGGCGTAATTGGAATTATCATGGCGGCTTTTTCGTTGATTGGCTTGCCGATTACCGTGCT
TTTGCCCCAATTATTAGTTAAGTGGGGACGGTTGGGCAAGTTGTTCTTAGTAGGATCTGCTGGAGTGACCGGCTTAATTG
CCTCAGGAATGTTATTTTTCCAAAACACTTCGTCCACGATATTTTGGATGATTGAAAGTTTGCTATTAGGTTATGCGATT
GGCCTTTTCTTCATGTTCGTAGTAACCATGTTTGCGATTAAGACCAGTAATCCTTATCGTACGGCTCAGCTTTCAGGGAT
GGCCCAAGCGGGTGGTTATTTCATTGCCGCTCTGGGACCAGTGACTTATGGCTGGGCCTTTGGTCTGAACCCAACCGGAA
ATCTACAAAATGTAGCCTTTGTGGTGGCCATTACCTTAGCAACCATCATGGGAGTAATCATTGTTAAAACCAAGAAAATT
TAA

Upstream 100 bases:

>100_bases
TTCAGTAAAACTGAAACCCAAGCAGATTAATTTAGGACTCTTTGGCTTTTTTACACTCTGATATAATAGTCATCGACTAA
TGAATTATAAGGAGAATGTT

Downstream 100 bases:

>100_bases
AGAAAACCTCCGAATTTCGTTTTGAAGTTCGGAGGTTTTTATTTTTGGGTACGAATTACATAAGAATCCAATAATACACG
AGATATAACTTGTAGGGGGA

Product: cyanate permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MNWKKGTLGASGMLVLVILIGLMLRTPITTLPLMLGDLANKLEVSKSSLGILTTLPLIMFMLFSSVASTILKKWGFKKSL
LGTLAILLVGSLLRLIVTMPTMIIGTSLIGMGIAYLNVYMPSFVTAYFPSNIGLYTSVYTFSMMFGVALFNVITAPIMVW
AGWWSMLIVLAITPLLALIIWLFLMPHLSEEIHEPQVEVKKEAMSNDQIWVNKKAWAFLIMFGSQSILNYTFTAWMPSLM
AYHQVGSGVIGIIMAAFSLIGLPITVLLPQLLVKWGRLGKLFLVGSAGVTGLIASGMLFFQNTSSTIFWMIESLLLGYAI
GLFFMFVVTMFAIKTSNPYRTAQLSGMAQAGGYFIAALGPVTYGWAFGLNPTGNLQNVAFVVAITLATIMGVIIVKTKKI

Sequences:

>Translated_400_residues
MNWKKGTLGASGMLVLVILIGLMLRTPITTLPLMLGDLANKLEVSKSSLGILTTLPLIMFMLFSSVASTILKKWGFKKSL
LGTLAILLVGSLLRLIVTMPTMIIGTSLIGMGIAYLNVYMPSFVTAYFPSNIGLYTSVYTFSMMFGVALFNVITAPIMVW
AGWWSMLIVLAITPLLALIIWLFLMPHLSEEIHEPQVEVKKEAMSNDQIWVNKKAWAFLIMFGSQSILNYTFTAWMPSLM
AYHQVGSGVIGIIMAAFSLIGLPITVLLPQLLVKWGRLGKLFLVGSAGVTGLIASGMLFFQNTSSTIFWMIESLLLGYAI
GLFFMFVVTMFAIKTSNPYRTAQLSGMAQAGGYFIAALGPVTYGWAFGLNPTGNLQNVAFVVAITLATIMGVIIVKTKKI
>Mature_400_residues
MNWKKGTLGASGMLVLVILIGLMLRTPITTLPLMLGDLANKLEVSKSSLGILTTLPLIMFMLFSSVASTILKKWGFKKSL
LGTLAILLVGSLLRLIVTMPTMIIGTSLIGMGIAYLNVYMPSFVTAYFPSNIGLYTSVYTFSMMFGVALFNVITAPIMVW
AGWWSMLIVLAITPLLALIIWLFLMPHLSEEIHEPQVEVKKEAMSNDQIWVNKKAWAFLIMFGSQSILNYTFTAWMPSLM
AYHQVGSGVIGIIMAAFSLIGLPITVLLPQLLVKWGRLGKLFLVGSAGVTGLIASGMLFFQNTSSTIFWMIESLLLGYAI
GLFFMFVVTMFAIKTSNPYRTAQLSGMAQAGGYFIAALGPVTYGWAFGLNPTGNLQNVAFVVAITLATIMGVIIVKTKKI

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=390, Percent_Identity=27.4358974358974, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43652; Mature: 43652

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWKKGTLGASGMLVLVILIGLMLRTPITTLPLMLGDLANKLEVSKSSLGILTTLPLIMF
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLFSSVASTILKKWGFKKSLLGTLAILLVGSLLRLIVTMPTMIIGTSLIGMGIAYLNVYM
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSFVTAYFPSNIGLYTSVYTFSMMFGVALFNVITAPIMVWAGWWSMLIVLAITPLLALII
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLFLMPHLSEEIHEPQVEVKKEAMSNDQIWVNKKAWAFLIMFGSQSILNYTFTAWMPSLM
HHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHH
AYHQVGSGVIGIIMAAFSLIGLPITVLLPQLLVKWGRLGKLFLVGSAGVTGLIASGMLFF
HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCEE
QNTSSTIFWMIESLLLGYAIGLFFMFVVTMFAIKTSNPYRTAQLSGMAQAGGYFIAALGP
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCCEEEEECCC
VTYGWAFGLNPTGNLQNVAFVVAITLATIMGVIIVKTKKI
HHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNWKKGTLGASGMLVLVILIGLMLRTPITTLPLMLGDLANKLEVSKSSLGILTTLPLIMF
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLFSSVASTILKKWGFKKSLLGTLAILLVGSLLRLIVTMPTMIIGTSLIGMGIAYLNVYM
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSFVTAYFPSNIGLYTSVYTFSMMFGVALFNVITAPIMVWAGWWSMLIVLAITPLLALII
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLFLMPHLSEEIHEPQVEVKKEAMSNDQIWVNKKAWAFLIMFGSQSILNYTFTAWMPSLM
HHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHH
AYHQVGSGVIGIIMAAFSLIGLPITVLLPQLLVKWGRLGKLFLVGSAGVTGLIASGMLFF
HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCEE
QNTSSTIFWMIESLLLGYAIGLFFMFVVTMFAIKTSNPYRTAQLSGMAQAGGYFIAALGP
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCCEEEEECCC
VTYGWAFGLNPTGNLQNVAFVVAITLATIMGVIIVKTKKI
HHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]