| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116491941
Identifier: 116491941
GI number: 116491941
Start: 151719
End: 151883
Strand: Direct
Name: 116491941
Synonym: PEPE_0127
Alternate gene names: NA
Gene position: 151719-151883 (Clockwise)
Preceding gene: 116491940
Following gene: 116491942
Centisome position: 8.28
GC content: 36.97
Gene sequence:
>165_bases ATGTATTCAAATATTCAAAGAAGTGGTGTAGCTTTTGTAAGCTTAAGTTGGGGGTTCATGTATCACCTATTAGCAACGCT CTCGATTTTTTTCGCAATTCTTGCTGTGGGGACGATTATTAGATGCATTTGGTCTGAAAAACACCAAGATCCAAATTGGC AATAA
Upstream 100 bases:
>100_bases ATTGCGTACCTTGGGGCGCTGGTTCAGCTGTTAAGCGGGTCAGCGGGTACGTGGAATCATCTAGATTAATGATTTAATTC AATAGGGGGACGAAAAAGTT
Downstream 100 bases:
>100_bases AAGATTCCTTTTAACATTTATAAATCATAAATAGAATGGAAGCGAGATTGGGAGAGGTTTTCATGAATAAAAAAGGGCTT CTGATATTGGTGATGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MYSNIQRSGVAFVSLSWGFMYHLLATLSIFFAILAVGTIIRCIWSEKHQDPNWQ
Sequences:
>Translated_54_residues MYSNIQRSGVAFVSLSWGFMYHLLATLSIFFAILAVGTIIRCIWSEKHQDPNWQ >Mature_54_residues MYSNIQRSGVAFVSLSWGFMYHLLATLSIFFAILAVGTIIRCIWSEKHQDPNWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6248; Mature: 6248
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSNIQRSGVAFVSLSWGFMYHLLATLSIFFAILAVGTIIRCIWSEKHQDPNWQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MYSNIQRSGVAFVSLSWGFMYHLLATLSIFFAILAVGTIIRCIWSEKHQDPNWQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA