| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is hisK [H]
Identifier: 116491924
GI number: 116491924
Start: 115638
End: 116438
Strand: Direct
Name: hisK [H]
Synonym: PEPE_0107
Alternate gene names: 116491924
Gene position: 115638-116438 (Clockwise)
Preceding gene: 116491923
Following gene: 116491926
Centisome position: 6.31
GC content: 41.82
Gene sequence:
>801_bases ATGATTATTTATGACCAGCATGTGCATACAAGCTTTTCGTTTGATTCAAATGAAAAGATGGAAGACTACATGAAGTTGGC CGGACAGGACTTTGTTTCCACGGAACATTTGGAATTTAACAATCCAGAAGTCCAAAACCATGATAGTATTCCAGACTACA CTAAATACGTGGCCGAAATTGAACGTTTGAAAAAAGCGACGGGCAAACGAGTTCATAAAGGAATTGAAATCGGGATGTCA GCCGGACAAGCAGATAAGATTAAAGACTATTTAGCCCACCATACGTTCGATATTAAGTTACTAAGTTTCCATCAAGATGG TACGAAAGACTTTGGGAGTAACATGGTCTCGCACTTAGATCCGCTTCAAGTGACGGATCAGTATTACCAGTTGATGTGGA AGGGAATCAACGAATTCCATGACGCCGATGTGTTAGCTCACTTCGATTACGGGGTACGGAGATTGAGTTTGACGTCTGGT CAATTCTCGACTACGGCCGGAGTCTTGCTCACTAACATCTTTAAAGTTGCCATTCAAAATAACTTGGCCTTTGAATTGAA CACCAAGAGCATGTACAAATACCACAACATTGGTTTGTATGATTACGCAATTGAAATCTACAAGCAATTAGGGGGCAAGC GTTATACGATTGGGTCAGACGCCCATGACGCAACGCACTATGAAGATCACTTCCGGGATGCCTTAGATATGCTCAAAGCC CACGACATTCATCACATTAATGTTTATCGGCAAGGAGCTATGACGGTGGTTCCTATTGATGATATTCCAGAAGACCTTTA A
Upstream 100 bases:
>100_bases TCCCTATCCTCTCCAAGCGTTGAGACAAGCGTTAAAATGCGTTGCTATGCTAAAATAGTAGTAGAGAACGGATACATTTT AGAACGAGGAGGGCAAAATT
Downstream 100 bases:
>100_bases TTATTTATAGTAGAAAAACTAAAAGAGTGAAGACCAACATGGTGACGAAACGCCGTCGTATGGGGGTTGGAGCTCTTTTT TTGTTGTGCAAAACGAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: HolPase [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MIIYDQHVHTSFSFDSNEKMEDYMKLAGQDFVSTEHLEFNNPEVQNHDSIPDYTKYVAEIERLKKATGKRVHKGIEIGMS AGQADKIKDYLAHHTFDIKLLSFHQDGTKDFGSNMVSHLDPLQVTDQYYQLMWKGINEFHDADVLAHFDYGVRRLSLTSG QFSTTAGVLLTNIFKVAIQNNLAFELNTKSMYKYHNIGLYDYAIEIYKQLGGKRYTIGSDAHDATHYEDHFRDALDMLKA HDIHHINVYRQGAMTVVPIDDIPEDL
Sequences:
>Translated_266_residues MIIYDQHVHTSFSFDSNEKMEDYMKLAGQDFVSTEHLEFNNPEVQNHDSIPDYTKYVAEIERLKKATGKRVHKGIEIGMS AGQADKIKDYLAHHTFDIKLLSFHQDGTKDFGSNMVSHLDPLQVTDQYYQLMWKGINEFHDADVLAHFDYGVRRLSLTSG QFSTTAGVLLTNIFKVAIQNNLAFELNTKSMYKYHNIGLYDYAIEIYKQLGGKRYTIGSDAHDATHYEDHFRDALDMLKA HDIHHINVYRQGAMTVVPIDDIPEDL >Mature_266_residues MIIYDQHVHTSFSFDSNEKMEDYMKLAGQDFVSTEHLEFNNPEVQNHDSIPDYTKYVAEIERLKKATGKRVHKGIEIGMS AGQADKIKDYLAHHTFDIKLLSFHQDGTKDFGSNMVSHLDPLQVTDQYYQLMWKGINEFHDADVLAHFDYGVRRLSLTSG QFSTTAGVLLTNIFKVAIQNNLAFELNTKSMYKYHNIGLYDYAIEIYKQLGGKRYTIGSDAHDATHYEDHFRDALDMLKA HDIHHINVYRQGAMTVVPIDDIPEDL
Specific function: Unknown
COG id: COG1387
COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PHP hydrolase family. HisK subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010140 - InterPro: IPR004013 - InterPro: IPR016195 [H]
Pfam domain/function: PF02811 PHP [H]
EC number: =3.1.3.15 [H]
Molecular weight: Translated: 30613; Mature: 30613
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIYDQHVHTSFSFDSNEKMEDYMKLAGQDFVSTEHLEFNNPEVQNHDSIPDYTKYVAEI CEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHH ERLKKATGKRVHKGIEIGMSAGQADKIKDYLAHHTFDIKLLSFHQDGTKDFGSNMVSHLD HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHCC PLQVTDQYYQLMWKGINEFHDADVLAHFDYGVRRLSLTSGQFSTTAGVLLTNIFKVAIQN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCC NLAFELNTKSMYKYHNIGLYDYAIEIYKQLGGKRYTIGSDAHDATHYEDHFRDALDMLKA CEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHH HDIHHINVYRQGAMTVVPIDDIPEDL CCCEEEEEEECCCEEEEECCCCCCCC >Mature Secondary Structure MIIYDQHVHTSFSFDSNEKMEDYMKLAGQDFVSTEHLEFNNPEVQNHDSIPDYTKYVAEI CEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHH ERLKKATGKRVHKGIEIGMSAGQADKIKDYLAHHTFDIKLLSFHQDGTKDFGSNMVSHLD HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHCC PLQVTDQYYQLMWKGINEFHDADVLAHFDYGVRRLSLTSGQFSTTAGVLLTNIFKVAIQN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCC NLAFELNTKSMYKYHNIGLYDYAIEIYKQLGGKRYTIGSDAHDATHYEDHFRDALDMLKA CEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHH HDIHHINVYRQGAMTVVPIDDIPEDL CCCEEEEEEECCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]