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The map label for this gene is psaA [H]

Identifier: 116491904

GI number: 116491904

Start: 95389

End: 96303

Strand: Reverse

Name: psaA [H]

Synonym: PEPE_0086

Alternate gene names: 116491904

Gene position: 96303-95389 (Counterclockwise)

Preceding gene: 116491905

Following gene: 116491900

Centisome position: 5.26

GC content: 32.68

Gene sequence:

>915_bases
ATGAAAAAATTAATAAAATTTGTAACGCTAGTATTCGCTTTTACCAGTACCTTAATACTAATGGCTGGCTGTTCTCAAAA
TAATTCGTCTACTAAAGATGGGAAAATAAAAATTACCACAACCACCGATTTTTATGGTGAAGTAGCGAAAGCTGTGGTCG
GTAACAAAGGAAAAGTGACATCTGCCATCAATGATCCCAATGTTGACCCTCACGATTATGAGCCAACTTCTAAAATAGCG
AAAAAGGTAACCAATTCTGATGTATTAATCGCAAATGGAGTTGGTTACGACGGTTGGATGGATAAGTTAGCCCAAAATGC
ACATAAAGCTACTTATATTAAAGTTGGGGAAGATCTTTTAAATAAACGAGAAGGTGACAACCCACATTTATGGTACAATC
CACAAACTATGCCTCATCTTGCTAACGATTTAGCAAAACAGTTTGGTAAATTACAACCTCAAAATAAAAAATATTTTAAA
GTTAACGCAAAAAAATATATTAAGTCTTTAAATGCAGTTAATCAGCAAATCAAGGGTATCAAAAAAATTACTAATAATAC
TAAGAATAAAAAAGCTTACGTGAGTGAACCAGTTTTCGATTATGCCTTAAAAGCTGTTGGATTTACAGTAGCGGATACTG
ATTTTGAAAAGGATACAGAAAACGGTGTCGACCCATCTCCAGCTACTATTAAAAAGTTACAAAAAAATATTAAAGAGCAT
GATATTTCGCTATTCGTTTTCAATAAACAGGTAGATTCAAAGGTAGTTAATAATTTGGTCAAGTTAGCAAAGAAAAATGA
TATTCCTATACTCCCTGTCACAGAAACCTTGCCCAAGGGAGAAACTTATAAATCATGGATGCTTAGCCAATATAAACAAC
TTCATAAAATAATTAGCAAAATAAATCAGGAATAA

Upstream 100 bases:

>100_bases
ATTAAAAAAAATAGGACTAATAAAAGATAGTATTTTTTATTATTTATACTTTTATAGATTTATTTGGCATACATTATTAA
ATTTAAATTTAGGAGTAGAT

Downstream 100 bases:

>100_bases
TAGCAAAATTATATATAGTACCTGTTAATTCCGTGGAAACAAGGTACAAAGTATAAAAAGGAATCCATCACTGAGTGAGT
AATGGATTCCTTTTTATACT

Product: ABC-type metal ion transport system, periplasmic component/surface adhesin

Products: NA

Alternate protein names: Pneumococcal surface adhesin A [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKKLIKFVTLVFAFTSTLILMAGCSQNNSSTKDGKIKITTTTDFYGEVAKAVVGNKGKVTSAINDPNVDPHDYEPTSKIA
KKVTNSDVLIANGVGYDGWMDKLAQNAHKATYIKVGEDLLNKREGDNPHLWYNPQTMPHLANDLAKQFGKLQPQNKKYFK
VNAKKYIKSLNAVNQQIKGIKKITNNTKNKKAYVSEPVFDYALKAVGFTVADTDFEKDTENGVDPSPATIKKLQKNIKEH
DISLFVFNKQVDSKVVNNLVKLAKKNDIPILPVTETLPKGETYKSWMLSQYKQLHKIISKINQE

Sequences:

>Translated_304_residues
MKKLIKFVTLVFAFTSTLILMAGCSQNNSSTKDGKIKITTTTDFYGEVAKAVVGNKGKVTSAINDPNVDPHDYEPTSKIA
KKVTNSDVLIANGVGYDGWMDKLAQNAHKATYIKVGEDLLNKREGDNPHLWYNPQTMPHLANDLAKQFGKLQPQNKKYFK
VNAKKYIKSLNAVNQQIKGIKKITNNTKNKKAYVSEPVFDYALKAVGFTVADTDFEKDTENGVDPSPATIKKLQKNIKEH
DISLFVFNKQVDSKVVNNLVKLAKKNDIPILPVTETLPKGETYKSWMLSQYKQLHKIISKINQE
>Mature_304_residues
MKKLIKFVTLVFAFTSTLILMAGCSQNNSSTKDGKIKITTTTDFYGEVAKAVVGNKGKVTSAINDPNVDPHDYEPTSKIA
KKVTNSDVLIANGVGYDGWMDKLAQNAHKATYIKVGEDLLNKREGDNPHLWYNPQTMPHLANDLAKQFGKLQPQNKKYFK
VNAKKYIKSLNAVNQQIKGIKKITNNTKNKKAYVSEPVFDYALKAVGFTVADTDFEKDTENGVDPSPATIKKLQKNIKEH
DISLFVFNKQVDSKVVNNLVKLAKKNDIPILPVTETLPKGETYKSWMLSQYKQLHKIISKINQE

Specific function: Part of an ATP-driven transport system for manganese. Also act as an adhesin which is involved on adherence to extracellular matrix. It is an important factor in pathogenesis and infection [H]

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family. Lipoprotein receptor antigen (Lrai) subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006127
- InterPro:   IPR006129
- InterPro:   IPR006128 [H]

Pfam domain/function: PF01297 SBP_bac_9 [H]

EC number: NA

Molecular weight: Translated: 34067; Mature: 34067

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIKFVTLVFAFTSTLILMAGCSQNNSSTKDGKIKITTTTDFYGEVAKAVVGNKGKVT
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHCCCCCEE
SAINDPNVDPHDYEPTSKIAKKVTNSDVLIANGVGYDGWMDKLAQNAHKATYIKVGEDLL
ECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHEECCHHHH
NKREGDNPHLWYNPQTMPHLANDLAKQFGKLQPQNKKYFKVNAKKYIKSLNAVNQQIKGI
HCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHH
KKITNNTKNKKAYVSEPVFDYALKAVGFTVADTDFEKDTENGVDPSPATIKKLQKNIKEH
HHHHCCCCCCHHHHCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC
DISLFVFNKQVDSKVVNNLVKLAKKNDIPILPVTETLPKGETYKSWMLSQYKQLHKIISK
CCEEEEECCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
INQE
HCCC
>Mature Secondary Structure
MKKLIKFVTLVFAFTSTLILMAGCSQNNSSTKDGKIKITTTTDFYGEVAKAVVGNKGKVT
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHCCCCCEE
SAINDPNVDPHDYEPTSKIAKKVTNSDVLIANGVGYDGWMDKLAQNAHKATYIKVGEDLL
ECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHEECCHHHH
NKREGDNPHLWYNPQTMPHLANDLAKQFGKLQPQNKKYFKVNAKKYIKSLNAVNQQIKGI
HCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHH
KKITNNTKNKKAYVSEPVFDYALKAVGFTVADTDFEKDTENGVDPSPATIKKLQKNIKEH
HHHHCCCCCCHHHHCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC
DISLFVFNKQVDSKVVNNLVKLAKKNDIPILPVTETLPKGETYKSWMLSQYKQLHKIISK
CCEEEEECCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
INQE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8945574; 9767595; 11463916; 9379902 [H]