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The map label for this gene is agrA [H]

Identifier: 116491902

GI number: 116491902

Start: 91952

End: 92698

Strand: Direct

Name: agrA [H]

Synonym: PEPE_0084

Alternate gene names: 116491902

Gene position: 91952-92698 (Clockwise)

Preceding gene: 116491901

Following gene: 116491903

Centisome position: 5.02

GC content: 30.92

Gene sequence:

>747_bases
ATGTATTCAATTATTGTTTGTGAAGATGACCCAACTCAACTTCATGCGATTAGTACTACTATTAAAAATTTTGTTCTTTT
CCATGAAGAAGATTTTGATAAATCATTTAGTACTCCCAATCCTGAAAAGTGCTTAGATTATCTTAAAAGTCATAATATTC
AAAATGGTATTTACCTTTTGGATATTGACTTAGGAACTAGTATGAATGGTATTGATCTAGCCGAACAAATCCGAAAATTA
GATGTGCAATCTGAAATTATATTTATTACTAGTCACAATGAAATGGCTTCATTAACTTTAAAGCGACGCGTTGAAGCTTT
AGGATTCATCAGCAAAGATAACTCCCTTGAAAAAATACGAGATGAAATCTATGAAACTCTCAATTTAGCAAGGCTTCGTT
CAGATGAGCGTAAAAATTTAAAAAGAAAAATCTTCAATTTCAGTATTGGAGTAAGAGTGTTCAATTTTGATTTAGATGAT
GTTTTAATACTTGAAACTGCTGAAATCCCACATCGACTAAATCTATTTACCAAAAGTGGTAAATATGAATTTTACGGAAG
GCTCCAAGACTACGAAAAGAAATACACCGAGCTTTTTCGTTGTTCCAGATCAGCTTTAATTAATATAAAAAATATATCGG
AATACAATGCTTCAACAAAGATGATTTATTTTGATTTATCGTTAAGCTGCAAGTGTTCAATAACCAAGACACGAGAACTA
AAACGACGTATACTAGCTAGCAAATAA

Upstream 100 bases:

>100_bases
TTTGAAGCAAAAGTATCCTAATTTATTTATTCATTTTTCGTCTAATAACTACCAATTTACTACCCAGATCATTATTAATT
AATATTGAAAGGAGGTAGTT

Downstream 100 bases:

>100_bases
GAGAAAAATTTTTTCTTAAGTTGTTCAAATGAGAATTTATAATTATATTTGAACATAAATACTTTCTGAATTGTACATTT
TTACGCCGTGATTTTAACTT

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MYSIIVCEDDPTQLHAISTTIKNFVLFHEEDFDKSFSTPNPEKCLDYLKSHNIQNGIYLLDIDLGTSMNGIDLAEQIRKL
DVQSEIIFITSHNEMASLTLKRRVEALGFISKDNSLEKIRDEIYETLNLARLRSDERKNLKRKIFNFSIGVRVFNFDLDD
VLILETAEIPHRLNLFTKSGKYEFYGRLQDYEKKYTELFRCSRSALINIKNISEYNASTKMIYFDLSLSCKCSITKTREL
KRRILASK

Sequences:

>Translated_248_residues
MYSIIVCEDDPTQLHAISTTIKNFVLFHEEDFDKSFSTPNPEKCLDYLKSHNIQNGIYLLDIDLGTSMNGIDLAEQIRKL
DVQSEIIFITSHNEMASLTLKRRVEALGFISKDNSLEKIRDEIYETLNLARLRSDERKNLKRKIFNFSIGVRVFNFDLDD
VLILETAEIPHRLNLFTKSGKYEFYGRLQDYEKKYTELFRCSRSALINIKNISEYNASTKMIYFDLSLSCKCSITKTREL
KRRILASK
>Mature_248_residues
MYSIIVCEDDPTQLHAISTTIKNFVLFHEEDFDKSFSTPNPEKCLDYLKSHNIQNGIYLLDIDLGTSMNGIDLAEQIRKL
DVQSEIIFITSHNEMASLTLKRRVEALGFISKDNSLEKIRDEIYETLNLARLRSDERKNLKRKIFNFSIGVRVFNFDLDD
VLILETAEIPHRLNLFTKSGKYEFYGRLQDYEKKYTELFRCSRSALINIKNISEYNASTKMIYFDLSLSCKCSITKTREL
KRRILASK

Specific function: Required for high-level post-exponential phase expression of a series of secreted proteins [H]

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 28953; Mature: 28953

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSIIVCEDDPTQLHAISTTIKNFVLFHEEDFDKSFSTPNPEKCLDYLKSHNIQNGIYLL
CEEEEEECCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEE
DIDLGTSMNGIDLAEQIRKLDVQSEIIFITSHNEMASLTLKRRVEALGFISKDNSLEKIR
EEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCEECCCCCHHHHH
DEIYETLNLARLRSDERKNLKRKIFNFSIGVRVFNFDLDDVLILETAEIPHRLNLFTKSG
HHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEEEEEECCCCEEEEEECCCCCEEEEEECCC
KYEFYGRLQDYEKKYTELFRCSRSALINIKNISEYNASTKMIYFDLSLSCKCSITKTREL
CEEEEHHHHHHHHHHHHHHHHCHHHEEEEECCHHCCCCEEEEEEEECEEEEEECHHHHHH
KRRILASK
HHHHHCCC
>Mature Secondary Structure
MYSIIVCEDDPTQLHAISTTIKNFVLFHEEDFDKSFSTPNPEKCLDYLKSHNIQNGIYLL
CEEEEEECCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEE
DIDLGTSMNGIDLAEQIRKLDVQSEIIFITSHNEMASLTLKRRVEALGFISKDNSLEKIR
EEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCEECCCCCHHHHH
DEIYETLNLARLRSDERKNLKRKIFNFSIGVRVFNFDLDDVLILETAEIPHRLNLFTKSG
HHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEEEEEECCCCEEEEEECCCCCEEEEEECCC
KYEFYGRLQDYEKKYTELFRCSRSALINIKNISEYNASTKMIYFDLSLSCKCSITKTREL
CEEEEHHHHHHHHHHHHHHHHCHHHEEEEECCHHCCCCEEEEEEEECEEEEEECHHHHHH
KRRILASK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA