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The map label for this gene is ydjC [C]

Identifier: 116491898

GI number: 116491898

Start: 88584

End: 89342

Strand: Direct

Name: ydjC [C]

Synonym: PEPE_0080

Alternate gene names: 116491898

Gene position: 88584-89342 (Clockwise)

Preceding gene: 116491897

Following gene: 116491901

Centisome position: 4.83

GC content: 33.33

Gene sequence:

>759_bases
GTGGAAACAAAACTAATTATTCGTGCAGACGATTTAGGCTATTCAGACGCAGTTAATATAGGTATTGAACGATCTGTTCA
TAAAGGGATAATTAATAATGTAGGCGTGATGGTTAACATGCCTACAACCTTGGACGGATTGTCTATGATCAGAGATACAA
AAGTTTGTCTAGGGCTACATGTAGTTATAAGTTCAGGACGACCTCTACTAAATCCTAAATTTATTCCGAGTATTGTTGAT
GATGATGGTGCTTTTCTTAGCTCTGCAGATTATCGAAAAGCTCCCAATGATTTTGTTAATTTAGATGAGGTTATTTTAGA
AATTGAAGCACAATATCAAAAATTTATAGAATTGGTTGGTCGAAAACCTGATTATTTTGAAGGACATGCAGTGGTTAGTG
ATAATTTCTTTAAAGGACTTTTAGTTGTTGCGAAATGCCATCAATTAAATTTATTGCAAGTTACTTTAAATTCAGGTAGA
CCGAGTTTATTATTCAAGGGACACAGTTTACATGTTTTTATGGAAAGCATGAATAAGGATTATAATCCTTATCAAACGTT
GAAACGAGCTGTATTATCTAGTTGTGATGAAGAATATCCAATGATGATATGTCACCCAGGATATTTAGATGATTACTTAT
TAAAACACTCAAGTTTAACCACACCTCGTACTAAAGAAGTAGAAATGCTGACTGATCCACAAGTCCGTGCTTGGTTATAC
CAACACCAGGTTAGGTTAATTAAATATAATGAAATTTAA

Upstream 100 bases:

>100_bases
TTGCGTTTGTAGTAGCTGCAATTGCAACATACAGTATTGGTATCGAATCTAAAACTAATAAACAATCAAATGAACAAATT
AAATTAGTGGAGGCATAATG

Downstream 100 bases:

>100_bases
CTATTTATGAGATCTATAAATGTTGTATGGATGCACATAACTAACTTAACCATAATTTTCTAGGCCAGCTAAAGCAACTT
AAAAAGTGAGCCCTCAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
METKLIIRADDLGYSDAVNIGIERSVHKGIINNVGVMVNMPTTLDGLSMIRDTKVCLGLHVVISSGRPLLNPKFIPSIVD
DDGAFLSSADYRKAPNDFVNLDEVILEIEAQYQKFIELVGRKPDYFEGHAVVSDNFFKGLLVVAKCHQLNLLQVTLNSGR
PSLLFKGHSLHVFMESMNKDYNPYQTLKRAVLSSCDEEYPMMICHPGYLDDYLLKHSSLTTPRTKEVEMLTDPQVRAWLY
QHQVRLIKYNEI

Sequences:

>Translated_252_residues
METKLIIRADDLGYSDAVNIGIERSVHKGIINNVGVMVNMPTTLDGLSMIRDTKVCLGLHVVISSGRPLLNPKFIPSIVD
DDGAFLSSADYRKAPNDFVNLDEVILEIEAQYQKFIELVGRKPDYFEGHAVVSDNFFKGLLVVAKCHQLNLLQVTLNSGR
PSLLFKGHSLHVFMESMNKDYNPYQTLKRAVLSSCDEEYPMMICHPGYLDDYLLKHSSLTTPRTKEVEMLTDPQVRAWLY
QHQVRLIKYNEI
>Mature_252_residues
METKLIIRADDLGYSDAVNIGIERSVHKGIINNVGVMVNMPTTLDGLSMIRDTKVCLGLHVVISSGRPLLNPKFIPSIVD
DDGAFLSSADYRKAPNDFVNLDEVILEIEAQYQKFIELVGRKPDYFEGHAVVSDNFFKGLLVVAKCHQLNLLQVTLNSGR
PSLLFKGHSLHVFMESMNKDYNPYQTLKRAVLSSCDEEYPMMICHPGYLDDYLLKHSSLTTPRTKEVEMLTDPQVRAWLY
QHQVRLIKYNEI

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Homo sapiens, GI63054868, Length=129, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=4e-13,
Organism=Escherichia coli, GI1788028, Length=264, Percent_Identity=26.8939393939394, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 28603; Mature: 28603

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKLIIRADDLGYSDAVNIGIERSVHKGIINNVGVMVNMPTTLDGLSMIRDTKVCLGLH
CCCEEEEEECCCCCCCCEECCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHEEE
VVISSGRPLLNPKFIPSIVDDDGAFLSSADYRKAPNDFVNLDEVILEIEAQYQKFIELVG
EEEECCCCCCCCCCCCEEECCCCCEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHC
RKPDYFEGHAVVSDNFFKGLLVVAKCHQLNLLQVTLNSGRPSLLFKGHSLHVFMESMNKD
CCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCHHEEEEHHHCCC
YNPYQTLKRAVLSSCDEEYPMMICHPGYLDDYLLKHSSLTTPRTKEVEMLTDPQVRAWLY
CCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHH
QHQVRLIKYNEI
HHHEEEEEECCC
>Mature Secondary Structure
METKLIIRADDLGYSDAVNIGIERSVHKGIINNVGVMVNMPTTLDGLSMIRDTKVCLGLH
CCCEEEEEECCCCCCCCEECCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHEEE
VVISSGRPLLNPKFIPSIVDDDGAFLSSADYRKAPNDFVNLDEVILEIEAQYQKFIELVG
EEEECCCCCCCCCCCCEEECCCCCEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHC
RKPDYFEGHAVVSDNFFKGLLVVAKCHQLNLLQVTLNSGRPSLLFKGHSLHVFMESMNKD
CCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCHHEEEEHHHCCC
YNPYQTLKRAVLSSCDEEYPMMICHPGYLDDYLLKHSSLTTPRTKEVEMLTDPQVRAWLY
CCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHH
QHQVRLIKYNEI
HHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]