| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116491876
Identifier: 116491876
GI number: 116491876
Start: 53451
End: 54203
Strand: Reverse
Name: 116491876
Synonym: PEPE_0058
Alternate gene names: NA
Gene position: 54203-53451 (Counterclockwise)
Preceding gene: 116491878
Following gene: 116491872
Centisome position: 2.96
GC content: 37.85
Gene sequence:
>753_bases TTGCAGAGTACACAAGACACAGATTTTAGTTACAATCCCGAATCACCAATGCGGGTTTTCAACCTTCATTGGTACAAAGA CCAAATGTCGGGTTGGATGACTTCTAGCTACATTTTATTAACTTTTGGAGTTTTATTTCTCTTAGTTACCGGTTTATATC ACAACCTTAATGCACTAGGAATTACATCCACTATTGCCGGCGTGATCGGCTTCACATGTACCCTAAGTATCACTAATGGA AAACCCATTAACGGGATTTTAGGTTTTGTGTCCGCAATCATGTTGATTTACGTTGCTACAATTACTGGTAATTTTAGTGA TGTAATCATGCAAGCAGCTTACATCGTTTTATTAGATATTCCCGTGGTTTTCAATAAACACTGGAATAGCAGTGAAGGCC TCGTTCCACGCTTAATGTCTGGGAAATATATCGTTCAAACGATAATCACTTTCTTAATTTTCTGGGCCTTAACTTACGGA TTAGACACCATTATTTTGACTAGTCCACGTCCTATTATTGATTCATTGAGTGCCACTTTAGGATTAACAGGAGCAGTTTT AACTGTTCGTCGATTCCGTTCAACTTATTATTTCTGGCTTGCTCAATCTATTATGAGTATTGCGCTTTGGAGTATGACAG CTCTTTCTGGTCATCCTGTTTGGGTACTATTCTTCACTTACTGCCTCTATCTCTTAAATGATGTTGTAGCATTGGTTTCT AGCAAATGGTTCCATCCAGACCAAAATAAATAA
Upstream 100 bases:
>100_bases AGGAGCGTATACTAGTTTAGTACTACTTTTTTTTGCAACCTTTTCAGCCTGAATCACCTTTCTACCGGGCTAATACAAAT CATAGAAAGAAGGAATTATT
Downstream 100 bases:
>100_bases TCTAAAGACCTCGTTGGAGGTCTTTTTTGTACAAAAAAATTGCACCGAGAATGAGAACTCTGGGTGCAATTTTATATTCA ATTAAATTTCATGAATATAG
Product: nicotinamide mononucleotide transporter
Products: NA
Alternate protein names: Nicotinamide Mononucleotide; Integral Membrane Protein; Nicotinamide Mononucleotide Transporter PnuC
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MQSTQDTDFSYNPESPMRVFNLHWYKDQMSGWMTSSYILLTFGVLFLLVTGLYHNLNALGITSTIAGVIGFTCTLSITNG KPINGILGFVSAIMLIYVATITGNFSDVIMQAAYIVLLDIPVVFNKHWNSSEGLVPRLMSGKYIVQTIITFLIFWALTYG LDTIILTSPRPIIDSLSATLGLTGAVLTVRRFRSTYYFWLAQSIMSIALWSMTALSGHPVWVLFFTYCLYLLNDVVALVS SKWFHPDQNK
Sequences:
>Translated_250_residues MQSTQDTDFSYNPESPMRVFNLHWYKDQMSGWMTSSYILLTFGVLFLLVTGLYHNLNALGITSTIAGVIGFTCTLSITNG KPINGILGFVSAIMLIYVATITGNFSDVIMQAAYIVLLDIPVVFNKHWNSSEGLVPRLMSGKYIVQTIITFLIFWALTYG LDTIILTSPRPIIDSLSATLGLTGAVLTVRRFRSTYYFWLAQSIMSIALWSMTALSGHPVWVLFFTYCLYLLNDVVALVS SKWFHPDQNK >Mature_250_residues MQSTQDTDFSYNPESPMRVFNLHWYKDQMSGWMTSSYILLTFGVLFLLVTGLYHNLNALGITSTIAGVIGFTCTLSITNG KPINGILGFVSAIMLIYVATITGNFSDVIMQAAYIVLLDIPVVFNKHWNSSEGLVPRLMSGKYIVQTIITFLIFWALTYG LDTIILTSPRPIIDSLSATLGLTGAVLTVRRFRSTYYFWLAQSIMSIALWSMTALSGHPVWVLFFTYCLYLLNDVVALVS SKWFHPDQNK
Specific function: Unknown
COG id: COG3201
COG function: function code H; Nicotinamide mononucleotide transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28045; Mature: 28045
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTQDTDFSYNPESPMRVFNLHWYKDQMSGWMTSSYILLTFGVLFLLVTGLYHNLNALG CCCCCCCCCCCCCCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ITSTIAGVIGFTCTLSITNGKPINGILGFVSAIMLIYVATITGNFSDVIMQAAYIVLLDI HHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEH PVVFNKHWNSSEGLVPRLMSGKYIVQTIITFLIFWALTYGLDTIILTSPRPIIDSLSATL HHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH GLTGAVLTVRRFRSTYYFWLAQSIMSIALWSMTALSGHPVWVLFFTYCLYLLNDVVALVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SKWFHPDQNK HCCCCCCCCC >Mature Secondary Structure MQSTQDTDFSYNPESPMRVFNLHWYKDQMSGWMTSSYILLTFGVLFLLVTGLYHNLNALG CCCCCCCCCCCCCCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ITSTIAGVIGFTCTLSITNGKPINGILGFVSAIMLIYVATITGNFSDVIMQAAYIVLLDI HHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEH PVVFNKHWNSSEGLVPRLMSGKYIVQTIITFLIFWALTYGLDTIILTSPRPIIDSLSATL HHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH GLTGAVLTVRRFRSTYYFWLAQSIMSIALWSMTALSGHPVWVLFFTYCLYLLNDVVALVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SKWFHPDQNK HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA