| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is yxeI [H]
Identifier: 116491875
GI number: 116491875
Start: 52344
End: 53369
Strand: Direct
Name: yxeI [H]
Synonym: PEPE_0057
Alternate gene names: 116491875
Gene position: 52344-53369 (Clockwise)
Preceding gene: 116491874
Following gene: 116491877
Centisome position: 2.86
GC content: 40.25
Gene sequence:
>1026_bases ATGTGTACTAATATTGAAATTACGGCTAAAAATGGAGAGCATTTTTGGGGGAGAACCATGGATTTAGCTTTACCAATGTT TGGCGAAGATCCAGAACACGACTTAGGAGCCCGTGGAATGATTACAACGATTCCAGCTGGCGTTGATATTGACAGCCAAC TTGCAAATTGGCAAGCAGACTATGCTGCCATGGGGATTGGTATAGGTGGAACGCACATTTTATTTGACGGGATTAACGAG CATGGATTAGCTGGTGACCTTCAAGTATTATTTGAGAGTACCGCCGATACATTGGAAAATATTCAACAACGGCAACAGGT TCCAGTGATGAATACAGAATTCGTAACGTACGTATTAACGCACTTTAAGAGCGTTAAAGAAATCCGTGAAAACTATCAAA ATTTCGCGGTAGTGGATCAACCTACAATGCTTAATGGTCATTCGATTTCATTCCCACTTCACTATAGCTTTGTTGATGAG AGTGGCGATGGAGTGGTGCTCGAGCCTGTAGATAATGGCTCCTTCAAACTTTATGATTCAGTGGGAGTGGTCACTAACAG CCCCGAATATAACTGGCACACTGTTAATTTACGTAATTATATTGCTTTAAATGAACTTAATATCAAACAACCTAAAACCT ATAAAAATGGGGTAACATTAAATCCGATTGAAGGCGGAACGGGATATGGCTTAACCGGCTTACCAGGAACGTATACATCA CCCGATCGTTTGGTGAGAAGTTTTATGGTTGCTAATTTAATGGATGATTTTGAAGCCGAAGATGGGATTGCTCAACTTTA TGCAGCTTTCCGACCGGTTATAATTCCACGAGGGATGGAGCGCAACACTTCAGAAGACATTTTGTCAGATTATACGCGTT ATTGGTCAGGATATGATTTGAAACAACGCAAAGTTTACATTCAAACTGGTCGAGGACTGGCTATTACAGCTAAGTGTTTA AATCAAACAGCCACTACCATTAGTTTTGATGAGGTTGACACTGGAAACTATATTCATGAAATTTAA
Upstream 100 bases:
>100_bases AACTTTCTCTAAGCTTTTTTATTTAGAGGGATAATGTTTTTATTCTTAAGTTAAAAATGGTATAAAGGTTTCGTTAGAAT TATTGAAAGAAGGCAATTAA
Downstream 100 bases:
>100_bases TTGAATATAAAATTGCACCCAGAGTTCTCATTCTCGGTGCAATTTTTTTGTACAAAAAAGACCTCCAACGAGGTCTTTAG ATTATTTATTTTGGTCTGGA
Product: penicillin V acylase precursor. cysteine peptidase. MEROPS family C59
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MCTNIEITAKNGEHFWGRTMDLALPMFGEDPEHDLGARGMITTIPAGVDIDSQLANWQADYAAMGIGIGGTHILFDGINE HGLAGDLQVLFESTADTLENIQQRQQVPVMNTEFVTYVLTHFKSVKEIRENYQNFAVVDQPTMLNGHSISFPLHYSFVDE SGDGVVLEPVDNGSFKLYDSVGVVTNSPEYNWHTVNLRNYIALNELNIKQPKTYKNGVTLNPIEGGTGYGLTGLPGTYTS PDRLVRSFMVANLMDDFEAEDGIAQLYAAFRPVIIPRGMERNTSEDILSDYTRYWSGYDLKQRKVYIQTGRGLAITAKCL NQTATTISFDEVDTGNYIHEI
Sequences:
>Translated_341_residues MCTNIEITAKNGEHFWGRTMDLALPMFGEDPEHDLGARGMITTIPAGVDIDSQLANWQADYAAMGIGIGGTHILFDGINE HGLAGDLQVLFESTADTLENIQQRQQVPVMNTEFVTYVLTHFKSVKEIRENYQNFAVVDQPTMLNGHSISFPLHYSFVDE SGDGVVLEPVDNGSFKLYDSVGVVTNSPEYNWHTVNLRNYIALNELNIKQPKTYKNGVTLNPIEGGTGYGLTGLPGTYTS PDRLVRSFMVANLMDDFEAEDGIAQLYAAFRPVIIPRGMERNTSEDILSDYTRYWSGYDLKQRKVYIQTGRGLAITAKCL NQTATTISFDEVDTGNYIHEI >Mature_341_residues MCTNIEITAKNGEHFWGRTMDLALPMFGEDPEHDLGARGMITTIPAGVDIDSQLANWQADYAAMGIGIGGTHILFDGINE HGLAGDLQVLFESTADTLENIQQRQQVPVMNTEFVTYVLTHFKSVKEIRENYQNFAVVDQPTMLNGHSISFPLHYSFVDE SGDGVVLEPVDNGSFKLYDSVGVVTNSPEYNWHTVNLRNYIALNELNIKQPKTYKNGVTLNPIEGGTGYGLTGLPGTYTS PDRLVRSFMVANLMDDFEAEDGIAQLYAAFRPVIIPRGMERNTSEDILSDYTRYWSGYDLKQRKVYIQTGRGLAITAKCL NQTATTISFDEVDTGNYIHEI
Specific function: Unknown
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: NA
Molecular weight: Translated: 37987; Mature: 37987
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTNIEITAKNGEHFWGRTMDLALPMFGEDPEHDLGARGMITTIPAGVDIDSQLANWQAD CCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCC YAAMGIGIGGTHILFDGINEHGLAGDLQVLFESTADTLENIQQRQQVPVMNTEFVTYVLT HHEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH HFKSVKEIRENYQNFAVVDQPTMLNGHSISFPLHYSFVDESGDGVVLEPVDNGSFKLYDS HHHHHHHHHHHHHCEEEECCCEEECCCEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEC VGVVTNSPEYNWHTVNLRNYIALNELNIKQPKTYKNGVTLNPIEGGTGYGLTGLPGTYTS CCEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC PDRLVRSFMVANLMDDFEAEDGIAQLYAAFRPVIIPRGMERNTSEDILSDYTRYWSGYDL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCC KQRKVYIQTGRGLAITAKCLNQTATTISFDEVDTGNYIHEI CCEEEEEEECCCEEEEHHHHCCCCCEEEECCCCCCCHHHCC >Mature Secondary Structure MCTNIEITAKNGEHFWGRTMDLALPMFGEDPEHDLGARGMITTIPAGVDIDSQLANWQAD CCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCC YAAMGIGIGGTHILFDGINEHGLAGDLQVLFESTADTLENIQQRQQVPVMNTEFVTYVLT HHEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH HFKSVKEIRENYQNFAVVDQPTMLNGHSISFPLHYSFVDESGDGVVLEPVDNGSFKLYDS HHHHHHHHHHHHHCEEEECCCEEECCCEEEEEEEEEEECCCCCEEEEEECCCCCEEEEEC VGVVTNSPEYNWHTVNLRNYIALNELNIKQPKTYKNGVTLNPIEGGTGYGLTGLPGTYTS CCEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC PDRLVRSFMVANLMDDFEAEDGIAQLYAAFRPVIIPRGMERNTSEDILSDYTRYWSGYDL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCC KQRKVYIQTGRGLAITAKCLNQTATTISFDEVDTGNYIHEI CCEEEEEEECCCEEEEHHHHCCCCCEEEECCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]