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The map label for this gene is 116491861

Identifier: 116491861

GI number: 116491861

Start: 40370

End: 41059

Strand: Direct

Name: 116491861

Synonym: PEPE_0043

Alternate gene names: NA

Gene position: 40370-41059 (Clockwise)

Preceding gene: 116491857

Following gene: 116491862

Centisome position: 2.2

GC content: 42.32

Gene sequence:

>690_bases
ATGGATAAGAAACAAAAAGCTGGAACACTCGCACAAAAAATCAATATCATCCGAGCTAGCGTAATGGGCGCAAATGACGG
TATTTTATCTGTTGCAGGAATTGTTTTAGGTGTAGCAGGAGCCACCACTAATAGTTTTGCCATATTTATATCTGGAATTT
CGGGGATGTTAGCTGGAACGGTTTCGATGGCCATGGGCGAATATGTATCGGTTAACTCCCAAAAAGATTCCCAAGAAAAT
GCGGTCAATGTTCAGCGTCAAGCTTTAAAAGATGACTATCAAAAAGAATTGGATTTTGTTGCTGAAAAATATGCGAATGA
CGGGATTCCAACAGACCTAGCCCAGAAGGCTGCGTCCGAAATGATGGAAAAAGATGCTCTCTTGACTACGGTCCGTGAGC
GATATGGTTTTGATATGAATAACTTTACCAGTCCTTATATGGCGGCCATTTCCTCCATGATTTCATTTTCATTGGGATCC
TTGTTGCCCTTGTTCACCATCACTTTCGCTAAACATAGTATTCGTGTGCCTTTAACCGTTGTTTCGGTTGCGATTGCCTT
GGCAGTTACTGGTTATGCAGCGGCAGTCATTGGTAAAGCGGTTCGTAGACGAGCGGTTTTACGAAACGTCTTGGCAGGTT
TAATTACAATGGCGATGACATACTTAATCGGTTCGCTATTTGCTAGATAA

Upstream 100 bases:

>100_bases
TTTATAAAAGATTTAAAAGAACTTTACAATTCCGGATGAAAAGAAGTAGAATTAGTTGTCAGTTTAAAATGATTCTAAAT
TAGAACAAGGGGATAGTAAG

Downstream 100 bases:

>100_bases
GGGGGAAAATAAGCATGAAGAAGAAAAAAGAAATCAGTTTAGACAATAAATTAAACATGCTACGGGCCGGAGTGCTAGGT
GCTAATGATGGAATTCTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Nodulin; Nodulin-Related Protein; Iron And Manganese Transporter; Rubrerythrin Subfamily; Membrane Associated Protein; Nodulin-Like Protein-Like Protein; Nodulin-Related Transmembrane Protein; Nodulin- Domain-Containing Protein; Nodulin-Related Integral Membrane Protein DUF; Transmembrane Protein; Ferritin-Like Domain Fused ; Mebrane Associated Protein DUF; Nodulin-; Ypothetical Protein SMU.

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MDKKQKAGTLAQKINIIRASVMGANDGILSVAGIVLGVAGATTNSFAIFISGISGMLAGTVSMAMGEYVSVNSQKDSQEN
AVNVQRQALKDDYQKELDFVAEKYANDGIPTDLAQKAASEMMEKDALLTTVRERYGFDMNNFTSPYMAAISSMISFSLGS
LLPLFTITFAKHSIRVPLTVVSVAIALAVTGYAAAVIGKAVRRRAVLRNVLAGLITMAMTYLIGSLFAR

Sequences:

>Translated_229_residues
MDKKQKAGTLAQKINIIRASVMGANDGILSVAGIVLGVAGATTNSFAIFISGISGMLAGTVSMAMGEYVSVNSQKDSQEN
AVNVQRQALKDDYQKELDFVAEKYANDGIPTDLAQKAASEMMEKDALLTTVRERYGFDMNNFTSPYMAAISSMISFSLGS
LLPLFTITFAKHSIRVPLTVVSVAIALAVTGYAAAVIGKAVRRRAVLRNVLAGLITMAMTYLIGSLFAR
>Mature_229_residues
MDKKQKAGTLAQKINIIRASVMGANDGILSVAGIVLGVAGATTNSFAIFISGISGMLAGTVSMAMGEYVSVNSQKDSQEN
AVNVQRQALKDDYQKELDFVAEKYANDGIPTDLAQKAASEMMEKDALLTTVRERYGFDMNNFTSPYMAAISSMISFSLGS
LLPLFTITFAKHSIRVPLTVVSVAIALAVTGYAAAVIGKAVRRRAVLRNVLAGLITMAMTYLIGSLFAR

Specific function: Unknown

COG id: COG1814

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24390; Mature: 24390

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKQKAGTLAQKINIIRASVMGANDGILSVAGIVLGVAGATTNSFAIFISGISGMLAGT
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VSMAMGEYVSVNSQKDSQENAVNVQRQALKDDYQKELDFVAEKYANDGIPTDLAQKAASE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
MMEKDALLTTVRERYGFDMNNFTSPYMAAISSMISFSLGSLLPLFTITFAKHSIRVPLTV
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VSVAIALAVTGYAAAVIGKAVRRRAVLRNVLAGLITMAMTYLIGSLFAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKKQKAGTLAQKINIIRASVMGANDGILSVAGIVLGVAGATTNSFAIFISGISGMLAGT
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VSMAMGEYVSVNSQKDSQENAVNVQRQALKDDYQKELDFVAEKYANDGIPTDLAQKAASE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
MMEKDALLTTVRERYGFDMNNFTSPYMAAISSMISFSLGSLLPLFTITFAKHSIRVPLTV
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VSVAIALAVTGYAAAVIGKAVRRRAVLRNVLAGLITMAMTYLIGSLFAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA