Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116491848

Identifier: 116491848

GI number: 116491848

Start: 28732

End: 30021

Strand: Direct

Name: 116491848

Synonym: PEPE_0030

Alternate gene names: NA

Gene position: 28732-30021 (Clockwise)

Preceding gene: 116491847

Following gene: 116491849

Centisome position: 1.57

GC content: 35.35

Gene sequence:

>1290_bases
ATGAATAAAAAAAGAATCACTGGTGCAGCTTTAGCTACTGCGCTTTTATTTGCACCTTTAGCTATCCAAACTTCTACAGC
AATGGCCGATAGTTTTTATACACAACAAACCAATGCTGAACGTGCCGATATTACTAACTGGGTAGCTAATACGACTGAAG
ACATTAGTAATAATATTAGTGCTCAACATATTGATACTAACAATTTGCATGGAAATAAATACGTAATTCAATGGGGAGAC
ACACTTTCTGGTATTTCAGATGCTACAGGCATCTCCATGGCTAAATTAGCTTATGATAATAATATACAAAATATCGACTT
AATCTACGCTGGTGATACCTTAGTTCTAAATCGTGATGGTGAAGTACCATCGGATTGGCACTATTATGGTGATGGTGTTT
ATGTTGCTAAGACCAAGGTAACTATCAATAACTTCGTTGATAATAGCCATAACACGGTAAACATTAATGTTTCACCAATA
AGTCATGAAGAAGGAAGTTCATCTAGTAAATCAAAAGATGATAGTAACGAATATATATCTGATTTAGATCCAGATGGTAA
GAAGGGTGAAGCAGCTAGTGATACTGATAGTTCATCAGATTCTAAATCAAGTTCTAAGAATCATCATTCAGATTCTAAAT
CAGATAGCGATGAAATGGATGAAAGTGACTTCTCAGATGCAGTTAGCAATGAAGTATCTAGTAAGTTAGGTTTGAATGAT
GGCAAGCTAACTGTAGACTTCACTGGTAAAGATGATGACTCTGATTCAGATGTTAATACTGATGATACAAGTGACGACTC
TGATTCAGATACAGAAGATGTTTATGATAATAATCAAAATATTTCAACCGGTAGTGATAAGCTTACAGATGAAAACGCTG
AAAAATTAGCTGACAAGATTGTTGCACAACTTAAGGCTGATGGTAAGACTAAAGATATCGATAAAGCGGATAATGTTGAA
TTGATGATTGAAGCTAACGATGATGACTTTAGTTTCAACGTAACTTTAACAACTACCGATGATTCCGATTCAGATGAAGA
CAGCAATAGTGATGATAGTGATGCTGATACAGATAGTGAAGGTGCAGATTCAGAAGATACCGATACAGATTCAGAAGACG
TAGACTCAAGTTCTGATGAAAGCTCCGATGAAGATACTGACTTTGATGACGAATCAGAAGACGCTGATACAGATACTGAA
GATGAAGATCAAAACTCAAGTTCTGAAGACGAAGATAGTAATAACCAAGTCACAACTAATGATGACGAAAATACAGATAC
TGAAGAATAA

Upstream 100 bases:

>100_bases
CTTTTTTACTCTATGGTATAAAAGTCATTGAGTATTAGGAAGTAAAAGCTTACTATAAAAGGTATATATAGTAATTAAAA
AGTCTTTTGGAGGAGTTTTT

Downstream 100 bases:

>100_bases
TTAACCGAGAGGAACTTTGGCTGATGAAGAAGAAATGGACAATTATTGGGATCATCGTTGCTGTGATCGTAATCGTATGT
GGCGGTGTGTACTGGAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MNKKRITGAALATALLFAPLAIQTSTAMADSFYTQQTNAERADITNWVANTTEDISNNISAQHIDTNNLHGNKYVIQWGD
TLSGISDATGISMAKLAYDNNIQNIDLIYAGDTLVLNRDGEVPSDWHYYGDGVYVAKTKVTINNFVDNSHNTVNINVSPI
SHEEGSSSSKSKDDSNEYISDLDPDGKKGEAASDTDSSSDSKSSSKNHHSDSKSDSDEMDESDFSDAVSNEVSSKLGLND
GKLTVDFTGKDDDSDSDVNTDDTSDDSDSDTEDVYDNNQNISTGSDKLTDENAEKLADKIVAQLKADGKTKDIDKADNVE
LMIEANDDDFSFNVTLTTTDDSDSDEDSNSDDSDADTDSEGADSEDTDTDSEDVDSSSDESSDEDTDFDDESEDADTDTE
DEDQNSSSEDEDSNNQVTTNDDENTDTEE

Sequences:

>Translated_429_residues
MNKKRITGAALATALLFAPLAIQTSTAMADSFYTQQTNAERADITNWVANTTEDISNNISAQHIDTNNLHGNKYVIQWGD
TLSGISDATGISMAKLAYDNNIQNIDLIYAGDTLVLNRDGEVPSDWHYYGDGVYVAKTKVTINNFVDNSHNTVNINVSPI
SHEEGSSSSKSKDDSNEYISDLDPDGKKGEAASDTDSSSDSKSSSKNHHSDSKSDSDEMDESDFSDAVSNEVSSKLGLND
GKLTVDFTGKDDDSDSDVNTDDTSDDSDSDTEDVYDNNQNISTGSDKLTDENAEKLADKIVAQLKADGKTKDIDKADNVE
LMIEANDDDFSFNVTLTTTDDSDSDEDSNSDDSDADTDSEGADSEDTDTDSEDVDSSSDESSDEDTDFDDESEDADTDTE
DEDQNSSSEDEDSNNQVTTNDDENTDTEE
>Mature_429_residues
MNKKRITGAALATALLFAPLAIQTSTAMADSFYTQQTNAERADITNWVANTTEDISNNISAQHIDTNNLHGNKYVIQWGD
TLSGISDATGISMAKLAYDNNIQNIDLIYAGDTLVLNRDGEVPSDWHYYGDGVYVAKTKVTINNFVDNSHNTVNINVSPI
SHEEGSSSSKSKDDSNEYISDLDPDGKKGEAASDTDSSSDSKSSSKNHHSDSKSDSDEMDESDFSDAVSNEVSSKLGLND
GKLTVDFTGKDDDSDSDVNTDDTSDDSDSDTEDVYDNNQNISTGSDKLTDENAEKLADKIVAQLKADGKTKDIDKADNVE
LMIEANDDDFSFNVTLTTTDDSDSDEDSNSDDSDADTDSEGADSEDTDTDSEDVDSSSDESSDEDTDFDDESEDADTDTE
DEDQNSSSEDEDSNNQVTTNDDENTDTEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46427; Mature: 46427

Theoretical pI: Translated: 3.57; Mature: 3.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKRITGAALATALLFAPLAIQTSTAMADSFYTQQTNAERADITNWVANTTEDISNNIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHCCCC
AQHIDTNNLHGNKYVIQWGDTLSGISDATGISMAKLAYDNNIQNIDLIYAGDTLVLNRDG
EEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEECCC
EVPSDWHYYGDGVYVAKTKVTINNFVDNSHNTVNINVSPISHEEGSSSSKSKDDSNEYIS
CCCCCCEEECCEEEEEEEEEEEEHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHH
DLDPDGKKGEAASDTDSSSDSKSSSKNHHSDSKSDSDEMDESDFSDAVSNEVSSKLGLND
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCC
GKLTVDFTGKDDDSDSDVNTDDTSDDSDSDTEDVYDNNQNISTGSDKLTDENAEKLADKI
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
VAQLKADGKTKDIDKADNVELMIEANDDDFSFNVTLTTTDDSDSDEDSNSDDSDADTDSE
HHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
GADSEDTDTDSEDVDSSSDESSDEDTDFDDESEDADTDTEDEDQNSSSEDEDSNNQVTTN
CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
DDENTDTEE
CCCCCCCCC
>Mature Secondary Structure
MNKKRITGAALATALLFAPLAIQTSTAMADSFYTQQTNAERADITNWVANTTEDISNNIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHCCCC
AQHIDTNNLHGNKYVIQWGDTLSGISDATGISMAKLAYDNNIQNIDLIYAGDTLVLNRDG
EEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEECCC
EVPSDWHYYGDGVYVAKTKVTINNFVDNSHNTVNINVSPISHEEGSSSSKSKDDSNEYIS
CCCCCCEEECCEEEEEEEEEEEEHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHH
DLDPDGKKGEAASDTDSSSDSKSSSKNHHSDSKSDSDEMDESDFSDAVSNEVSSKLGLND
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCC
GKLTVDFTGKDDDSDSDVNTDDTSDDSDSDTEDVYDNNQNISTGSDKLTDENAEKLADKI
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
VAQLKADGKTKDIDKADNVELMIEANDDDFSFNVTLTTTDDSDSDEDSNSDDSDADTDSE
HHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
GADSEDTDTDSEDVDSSSDESSDEDTDFDDESEDADTDTEDEDQNSSSEDEDSNNQVTTN
CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
DDENTDTEE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA