| Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008511 |
| Length | 299,762 |
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The map label for this gene is 116332635
Identifier: 116332635
GI number: 116332635
Start: 248744
End: 249466
Strand: Direct
Name: 116332635
Synonym: LBJ_4215
Alternate gene names: NA
Gene position: 248744-249466 (Clockwise)
Preceding gene: 116332634
Following gene: 116332636
Centisome position: 82.98
GC content: 38.45
Gene sequence:
>723_bases ATGCACAAGTTTTCCTTTTCTTTTATGAACGTAATCGAAGAAGCCGGGGAAGTTTTAATAAAACCGGTTTCCTTTTTTAA GGATCTTTCCAAAGCTCCCGAAGAATCCTTGATCTCCTTATATCTTCGTTGTTTAATTTACATGAGCTTTTTATACGCGG TCGCAGTAATCAGCACGACCTTACTTGCTCCGAATGAATTTCCCAGTCCGTCCTTGATTTTTTTATTTTTCGAAATGCCA ACGGCGTATTTGCTCGCAAGTTTTCTTATTTTTCCTATTTTAGGTTTTCTTTATATGTTTTTCTCCTGGATCTGCGGGGG CAATACCGGTTGGAAAAAAAACTTCAGAGCCGGCACCGCTAGTTTAAGTGTGTTTTGGGCGATACTACTTTTGCAAAGCT TTGGCGGTTTGATTCACATTTATCTGGGAATGTGGATCGGAATCGCTTTTACCGCATACGTTCCGTTTTTATTCTTTCTT GCTTTGACTTCTTATCTAAAAGCTCCCGTAAAAAGGACCGCGATTGTACTTTCCCTATTTATGATCGTACTTTTGTATCT TCAATACTCAAGAATGAATTCATACATGAAAGATCATAAAATCGTCGAGAACGTGAATTCCCAAAAATCCACTACGATAG AAAAAGAAAAACAAGAAGAACGGGAAACGATGGAGATCATCCGAAAGGCAATGGAAAAAGCAAAAGCCGAAGAACAAAGG TAA
Upstream 100 bases:
>100_bases ACGACGTTGCTAAGTTGGATATGGAGAAACATATAAACGACGCTCGGATTCTTTTCCTCTTGCCACGTAAGTTTTTAGAA AAAAACCTGTGTGAAAATCA
Downstream 100 bases:
>100_bases CCGTGGTTTTCAAAACTTTCGACATTTTCGTCAAATTTGCGTCGAAAATTCTTATAATTTAACGTGAGTTCGATATAACA AATGCGAAAGCGATTGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MHKFSFSFMNVIEEAGEVLIKPVSFFKDLSKAPEESLISLYLRCLIYMSFLYAVAVISTTLLAPNEFPSPSLIFLFFEMP TAYLLASFLIFPILGFLYMFFSWICGGNTGWKKNFRAGTASLSVFWAILLLQSFGGLIHIYLGMWIGIAFTAYVPFLFFL ALTSYLKAPVKRTAIVLSLFMIVLLYLQYSRMNSYMKDHKIVENVNSQKSTTIEKEKQEERETMEIIRKAMEKAKAEEQR
Sequences:
>Translated_240_residues MHKFSFSFMNVIEEAGEVLIKPVSFFKDLSKAPEESLISLYLRCLIYMSFLYAVAVISTTLLAPNEFPSPSLIFLFFEMP TAYLLASFLIFPILGFLYMFFSWICGGNTGWKKNFRAGTASLSVFWAILLLQSFGGLIHIYLGMWIGIAFTAYVPFLFFL ALTSYLKAPVKRTAIVLSLFMIVLLYLQYSRMNSYMKDHKIVENVNSQKSTTIEKEKQEERETMEIIRKAMEKAKAEEQR >Mature_240_residues MHKFSFSFMNVIEEAGEVLIKPVSFFKDLSKAPEESLISLYLRCLIYMSFLYAVAVISTTLLAPNEFPSPSLIFLFFEMP TAYLLASFLIFPILGFLYMFFSWICGGNTGWKKNFRAGTASLSVFWAILLLQSFGGLIHIYLGMWIGIAFTAYVPFLFFL ALTSYLKAPVKRTAIVLSLFMIVLLYLQYSRMNSYMKDHKIVENVNSQKSTTIEKEKQEERETMEIIRKAMEKAKAEEQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27638; Mature: 27638
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKFSFSFMNVIEEAGEVLIKPVSFFKDLSKAPEESLISLYLRCLIYMSFLYAVAVISTT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAPNEFPSPSLIFLFFEMPTAYLLASFLIFPILGFLYMFFSWICGGNTGWKKNFRAGTA HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH SLSVFWAILLLQSFGGLIHIYLGMWIGIAFTAYVPFLFFLALTSYLKAPVKRTAIVLSLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIVLLYLQYSRMNSYMKDHKIVENVNSQKSTTIEKEKQEERETMEIIRKAMEKAKAEEQR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHKFSFSFMNVIEEAGEVLIKPVSFFKDLSKAPEESLISLYLRCLIYMSFLYAVAVISTT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAPNEFPSPSLIFLFFEMPTAYLLASFLIFPILGFLYMFFSWICGGNTGWKKNFRAGTA HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH SLSVFWAILLLQSFGGLIHIYLGMWIGIAFTAYVPFLFFLALTSYLKAPVKRTAIVLSLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIVLLYLQYSRMNSYMKDHKIVENVNSQKSTTIEKEKQEERETMEIIRKAMEKAKAEEQR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA