| Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008511 |
| Length | 299,762 |
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The map label for this gene is 116332630
Identifier: 116332630
GI number: 116332630
Start: 237895
End: 239859
Strand: Reverse
Name: 116332630
Synonym: LBJ_4208
Alternate gene names: NA
Gene position: 239859-237895 (Counterclockwise)
Preceding gene: 116332631
Following gene: 116332629
Centisome position: 80.02
GC content: 42.34
Gene sequence:
>1965_bases ATGGAAGAATTATTCGTTAAAAACGGGCACTTCGCAAGTAAAGACGGAACGATCTATCAACTACGCGGAGTTAATCTTTC CGGCTCTGCGAAACTTCCCTCCAAACCAGACGGAACCACACATTTTGATCAAACCCTCACGTTCTTGAATCATAGAAACG TATCTTTTGTTGGAAGACCTCTGGAAGAGAAGCAGGCTTCAGAACATTTCGATAGATTGAGAAAATGGGGATTCAATTTC TTACGGTTTCTCATAACGTGGGAAGCGATTGAACACAAAGGTCCCGGAAAATACGATACCGAATACATAGACTACGTAGA AAGAATGGTTTCGCTTGCCGGCCAAAAAGGGTTTTATCTTTTTATCGATCCGCACCAGGATGTGTGGTCTCGGTTTACGG GAGGAGACGGCGCCCCCGGTTGGACTTTGGAAGAGATAGGAATGGACATTTCCAAAATTCAAGGTTCGGAAACGGCAATT GTCCATCATCACCAAGGAAGGCATTATAGAAGAATGTCCTGGCCTCTCAATTATCAAAAATACGTTTGTGGGACGATGTT CTCTTTATTTTTTGGAGGAAAAGAGTTTGCACCGAACACTAAGATTGATGGAAAGAATGCACAGGATTTTTTACAAGATC ACTACATCGATTCCGTACTCAAGATAGTGCGCAAACTTAAAAAGTATAAAAACGTAATAGGATTTGATACCTTGAATGAA CCTTCTCCAGGATGGATCGGTAAAAGGAACTTGGGAGAGTTCGAAGGGTTCGGATTCGGAAAAGTGATCAAAACTTCTCC GTTCAAGGAGATGTATCTTTCCGAAGGGCGCACTGTTTCTACGGAGCAAGCTTATATGCTCGGATTCTGGAGTTTCCCTT GGGGTAAAGTGCGATTGAATGACGGGGGAGTTTCTCTTTGGAAACGGGGATATCAATGTGTTTGGAGAGATCACAGGGTC TGGGACTACGATCCGAACGGCGCACCGATGATGTTAAAGCCGGAGTATTTCTATAAGAGGAACGGAAAAAAATACGAATT CTATTCCGATTTTATGCATCCTTTTATTAAAAAGCTCAAGGAAGCGGTACAAAGGGTCGAAAGTCGTTTTCATATCTTTG TGGAAAGTGATCCTTCGAAACTAGAGCTGGAATGGAAGGAAATCCCTAAGAAAAATTACGGCTCCGTAGTCAATGCGACC CACTGGTACGATATATCCGTGTTGATGCTCAAACGTTATTTTCCTTGGTTTGGGGTTCACGTATTCAAACAAAAACCTGT ATTCGGAAAAGAGAATGTAGATAGGGCTTATGAGGAAACGGTTCGAATGATTCGGGAAATGTCCGAAAAAAAAATGGGCA ATTGTCCCACGGTAATCGGAGAAACCGGAATCCCTATGGACATCAACCACAGTATTGCATATCACAAAAAGGATTACAGA ATATTGGAACAAGCTCTTGATCGAGTGATGAAAGCGGTGGAAAAAAATTTCGTTCATCTTGCGTTATGGAACTATACTCC CGATCATACTCACAGTTTGGGGGATAGATGGAACGAAGAGGATTTATCGATCTATTCCGAGGACACACCCACTTCGTATG ACGAAGATGGAGGTAGGGCGGTGCGGGCGTTTAGTCGTCCGTATCCGATTCGAACGAAAGGATTGCCTGTGGCTTTGTCT TTCGATATGGAAAGGTCCTTATTCAAATATTCCTTTCGACAAGAAGGAGATGTATTGCCGGAAACGGAGATTTTTATCCC GGAAATACATTATAAAAACGGATTTGAAGTTTCGATCAACGCGGGTAAGTACCACTATGATTCCCGCACCAAAGTATTAA AATTTAAGGGAGAAAAGGGGGTTATACATTATGGAATAACCATTCACTCCTCCAAAAAATCACTTTTCAGGGAACAAGAT CGGACTAAAGTGGTCCCCAATACTCAAAAGAGGAATATTAGATGA
Upstream 100 bases:
>100_bases TTGGCTCTTCGCAAAGCGAGGAAAACGAAGAATGTCTTCTTCATAGACAAAGCGAAGCAATAAAAAAGAGAATTCGATCG AATTCAATTCGAGGGATATT
Downstream 100 bases:
>100_bases AAAAAGCTCTCATGATTTCCCTAGGCGCTCTTACTGTTCTTTCGTTGACCGTAGCGTGTCCTGGTTCGAAATATTCGGCT GAAGAATGTGCCCCGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 654; Mature: 654
Protein sequence:
>654_residues MEELFVKNGHFASKDGTIYQLRGVNLSGSAKLPSKPDGTTHFDQTLTFLNHRNVSFVGRPLEEKQASEHFDRLRKWGFNF LRFLITWEAIEHKGPGKYDTEYIDYVERMVSLAGQKGFYLFIDPHQDVWSRFTGGDGAPGWTLEEIGMDISKIQGSETAI VHHHQGRHYRRMSWPLNYQKYVCGTMFSLFFGGKEFAPNTKIDGKNAQDFLQDHYIDSVLKIVRKLKKYKNVIGFDTLNE PSPGWIGKRNLGEFEGFGFGKVIKTSPFKEMYLSEGRTVSTEQAYMLGFWSFPWGKVRLNDGGVSLWKRGYQCVWRDHRV WDYDPNGAPMMLKPEYFYKRNGKKYEFYSDFMHPFIKKLKEAVQRVESRFHIFVESDPSKLELEWKEIPKKNYGSVVNAT HWYDISVLMLKRYFPWFGVHVFKQKPVFGKENVDRAYEETVRMIREMSEKKMGNCPTVIGETGIPMDINHSIAYHKKDYR ILEQALDRVMKAVEKNFVHLALWNYTPDHTHSLGDRWNEEDLSIYSEDTPTSYDEDGGRAVRAFSRPYPIRTKGLPVALS FDMERSLFKYSFRQEGDVLPETEIFIPEIHYKNGFEVSINAGKYHYDSRTKVLKFKGEKGVIHYGITIHSSKKSLFREQD RTKVVPNTQKRNIR
Sequences:
>Translated_654_residues MEELFVKNGHFASKDGTIYQLRGVNLSGSAKLPSKPDGTTHFDQTLTFLNHRNVSFVGRPLEEKQASEHFDRLRKWGFNF LRFLITWEAIEHKGPGKYDTEYIDYVERMVSLAGQKGFYLFIDPHQDVWSRFTGGDGAPGWTLEEIGMDISKIQGSETAI VHHHQGRHYRRMSWPLNYQKYVCGTMFSLFFGGKEFAPNTKIDGKNAQDFLQDHYIDSVLKIVRKLKKYKNVIGFDTLNE PSPGWIGKRNLGEFEGFGFGKVIKTSPFKEMYLSEGRTVSTEQAYMLGFWSFPWGKVRLNDGGVSLWKRGYQCVWRDHRV WDYDPNGAPMMLKPEYFYKRNGKKYEFYSDFMHPFIKKLKEAVQRVESRFHIFVESDPSKLELEWKEIPKKNYGSVVNAT HWYDISVLMLKRYFPWFGVHVFKQKPVFGKENVDRAYEETVRMIREMSEKKMGNCPTVIGETGIPMDINHSIAYHKKDYR ILEQALDRVMKAVEKNFVHLALWNYTPDHTHSLGDRWNEEDLSIYSEDTPTSYDEDGGRAVRAFSRPYPIRTKGLPVALS FDMERSLFKYSFRQEGDVLPETEIFIPEIHYKNGFEVSINAGKYHYDSRTKVLKFKGEKGVIHYGITIHSSKKSLFREQD RTKVVPNTQKRNIR >Mature_654_residues MEELFVKNGHFASKDGTIYQLRGVNLSGSAKLPSKPDGTTHFDQTLTFLNHRNVSFVGRPLEEKQASEHFDRLRKWGFNF LRFLITWEAIEHKGPGKYDTEYIDYVERMVSLAGQKGFYLFIDPHQDVWSRFTGGDGAPGWTLEEIGMDISKIQGSETAI VHHHQGRHYRRMSWPLNYQKYVCGTMFSLFFGGKEFAPNTKIDGKNAQDFLQDHYIDSVLKIVRKLKKYKNVIGFDTLNE PSPGWIGKRNLGEFEGFGFGKVIKTSPFKEMYLSEGRTVSTEQAYMLGFWSFPWGKVRLNDGGVSLWKRGYQCVWRDHRV WDYDPNGAPMMLKPEYFYKRNGKKYEFYSDFMHPFIKKLKEAVQRVESRFHIFVESDPSKLELEWKEIPKKNYGSVVNAT HWYDISVLMLKRYFPWFGVHVFKQKPVFGKENVDRAYEETVRMIREMSEKKMGNCPTVIGETGIPMDINHSIAYHKKDYR ILEQALDRVMKAVEKNFVHLALWNYTPDHTHSLGDRWNEEDLSIYSEDTPTSYDEDGGRAVRAFSRPYPIRTKGLPVALS FDMERSLFKYSFRQEGDVLPETEIFIPEIHYKNGFEVSINAGKYHYDSRTKVLKFKGEKGVIHYGITIHSSKKSLFREQD RTKVVPNTQKRNIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322197, Length=745, Percent_Identity=29.7986577181208, Blast_Score=309, Evalue=1e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76485; Mature: 76485
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEELFVKNGHFASKDGTIYQLRGVNLSGSAKLPSKPDGTTHFDQTLTFLNHRNVSFVGRP CCCEEECCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCC LEEKQASEHFDRLRKWGFNFLRFLITWEAIEHKGPGKYDTEYIDYVERMVSLAGQKGFYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEE FIDPHQDVWSRFTGGDGAPGWTLEEIGMDISKIQGSETAIVHHHQGRHYRRMSWPLNYQK EECCCHHHHHHCCCCCCCCCCCHHHHCCCHHHCCCCCEEEEEECCCCCEEEECCCCCHHH YVCGTMFSLFFGGKEFAPNTKIDGKNAQDFLQDHYIDSVLKIVRKLKKYKNVIGFDTLNE HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PSPGWIGKRNLGEFEGFGFGKVIKTSPFKEMYLSEGRTVSTEQAYMLGFWSFPWGKVRLN CCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCEECCCCEEEEEEECCCCCEEEEC DGGVSLWKRGYQCVWRDHRVWDYDPNGAPMMLKPEYFYKRNGKKYEFYSDFMHPFIKKLK CCCHHHHHCCCCEEEECCEEEEECCCCCCEEECCHHHHHCCCCCCHHHHHHHHHHHHHHH EAVQRVESRFHIFVESDPSKLELEWKEIPKKNYGSVVNATHWYDISVLMLKRYFPWFGVH HHHHHHHCCEEEEEECCCCEEEEEHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCHHCEE VFKQKPVFGKENVDRAYEETVRMIREMSEKKMGNCPTVIGETGIPMDINHSIAYHKKDYR EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEECCCCEEECHHHHH ILEQALDRVMKAVEKNFVHLALWNYTPDHTHSLGDRWNEEDLSIYSEDTPTSYDEDGGRA HHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCE VRAFSRPYPIRTKGLPVALSFDMERSLFKYSFRQEGDVLPETEIFIPEIHYKNGFEVSIN EHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEE AGKYHYDSRTKVLKFKGEKGVIHYGITIHSSKKSLFREQDRTKVVPNTQKRNIR CCEEEECCCCEEEEEECCCCEEEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MEELFVKNGHFASKDGTIYQLRGVNLSGSAKLPSKPDGTTHFDQTLTFLNHRNVSFVGRP CCCEEECCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCC LEEKQASEHFDRLRKWGFNFLRFLITWEAIEHKGPGKYDTEYIDYVERMVSLAGQKGFYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEE FIDPHQDVWSRFTGGDGAPGWTLEEIGMDISKIQGSETAIVHHHQGRHYRRMSWPLNYQK EECCCHHHHHHCCCCCCCCCCCHHHHCCCHHHCCCCCEEEEEECCCCCEEEECCCCCHHH YVCGTMFSLFFGGKEFAPNTKIDGKNAQDFLQDHYIDSVLKIVRKLKKYKNVIGFDTLNE HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PSPGWIGKRNLGEFEGFGFGKVIKTSPFKEMYLSEGRTVSTEQAYMLGFWSFPWGKVRLN CCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHCCCCEECCCCEEEEEEECCCCCEEEEC DGGVSLWKRGYQCVWRDHRVWDYDPNGAPMMLKPEYFYKRNGKKYEFYSDFMHPFIKKLK CCCHHHHHCCCCEEEECCEEEEECCCCCCEEECCHHHHHCCCCCCHHHHHHHHHHHHHHH EAVQRVESRFHIFVESDPSKLELEWKEIPKKNYGSVVNATHWYDISVLMLKRYFPWFGVH HHHHHHHCCEEEEEECCCCEEEEEHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCHHCEE VFKQKPVFGKENVDRAYEETVRMIREMSEKKMGNCPTVIGETGIPMDINHSIAYHKKDYR EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEECCCCEEECHHHHH ILEQALDRVMKAVEKNFVHLALWNYTPDHTHSLGDRWNEEDLSIYSEDTPTSYDEDGGRA HHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCE VRAFSRPYPIRTKGLPVALSFDMERSLFKYSFRQEGDVLPETEIFIPEIHYKNGFEVSIN EHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEE AGKYHYDSRTKVLKFKGEKGVIHYGITIHSSKKSLFREQDRTKVVPNTQKRNIR CCEEEECCCCEEEEEECCCCEEEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA