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The map label for this gene is cbiX [H]

Identifier: 116332604

GI number: 116332604

Start: 206916

End: 208109

Strand: Direct

Name: cbiX [H]

Synonym: LBJ_4177

Alternate gene names: 116332604

Gene position: 206916-208109 (Clockwise)

Preceding gene: 116332603

Following gene: 116332605

Centisome position: 69.03

GC content: 43.05

Gene sequence:

>1194_bases
GTGAGTAGAAACATTCTCGGAATTTTTATCGTCGGGCACGGAAGTAGAGACCTCTCCTCCAGTGCAGAATTCGAGGCATT
CGTCGAAGGATACCGCAAGCTCCATCCGGAATACGAAATCGACATCGGGTATGTAGAACTCGCGGAACCGGTTTTTAAAA
CGGCGCTTCTGGAATTCGCAAAAACACGGAATCGGATTTTAATTTTCCCGTTGTTTTTGTTCGCTTCCAATCACGTTAAA
AACGACATCCCTTTGGTTCTTTCCGACTTAAAAGAAAAGTTCCCGGATCATCAATTTATATCCGCGATGCCCCTGGGAAT
ACATGAGAATATTACAAAATTATTATCAATTCGTTCGAAAGAAAGCGGCATCTTCAAAGAAGAATCCAAATCCAAAACGG
GAGTGATCGTGGTGAGCCGAGGAGCCTCCGATGCGGATTCCAACGGTAACTTCTACAAGGCCGTTCGGTTTTTTGAGGAG
TCCAATTCTTTTCTTTTCGTAAAACCCAGTTTTATCGGCATCACCAAACCTCTCTTACACGAAAGTATCGAAATGTCGGC
AAAACTCAGACCGGACCGTCTGTTGATTCTCCCGTATTTTTTATTTAACGGAAAGTTAATACAAAAAATTTCTTATATAA
CAAAAGAATATTCCCTAAAATATCCTTGGATCAAAATCGAAACCGCCTCCCATTTCGGACCTGATCCGATTTTATATCCG
ATTCTTGACGAAAGGATTGCCCAAGCTCTTTCCGGCAAGGATGCTCTTCCTTGCGACAATTGTGAATATCGAGTTTCCAT
TCCGGGCCTAAAAAACAAAGTCGGAGGCCTCAATTCTCTTCTTTGGAGCATGAGACATTTGGAAACTCATACTCAAGCCG
CTCCTCACGAGTTCCCCCACAGAAATTTGATAAAACACGTGTATATCTGCGAAAGTACGAACTGTGCAAGTAAAGGTAGC
ATTTCACTGATCCATCGAATCCGTTCTTGTATCAAAAAACACGGAAAACAAACGGACTTTCGAGTTTCCAAAAGTTCCTG
TTTAGGCAGATGCGGGGAAGGGCCTACTTTGGTCGTGTATCCGGACGGAATTTGGTATCAAAGGGTAAACGAAAACGACG
CGGAAGAAATTGTCACCGAACATTTGTTTAACGATCGATTGGTCGCAAGACTCGTCGACAACATCATGCAGTAA

Upstream 100 bases:

>100_bases
TAGTCTATGCCATTCGTTCGTCAGTTGATCGGTTTTAGATTCACTTTGAAAGGAGGAGTATTACGTTGTATGCCGTTTCT
ACGTCCGCAAGTCAAAAAAA

Downstream 100 bases:

>100_bases
AATGAGGAGGATACAATGGCATGTCAGGAAATAGCCGCTCTACGGTTGGGTATGATGAGTGTACTCGGAATCAAGGACGA
GGTAACAACCCTACACGAAC

Product: ferredoxin related-protein

Products: NA

Alternate protein names: CbiXL [H]

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MSRNILGIFIVGHGSRDLSSSAEFEAFVEGYRKLHPEYEIDIGYVELAEPVFKTALLEFAKTRNRILIFPLFLFASNHVK
NDIPLVLSDLKEKFPDHQFISAMPLGIHENITKLLSIRSKESGIFKEESKSKTGVIVVSRGASDADSNGNFYKAVRFFEE
SNSFLFVKPSFIGITKPLLHESIEMSAKLRPDRLLILPYFLFNGKLIQKISYITKEYSLKYPWIKIETASHFGPDPILYP
ILDERIAQALSGKDALPCDNCEYRVSIPGLKNKVGGLNSLLWSMRHLETHTQAAPHEFPHRNLIKHVYICESTNCASKGS
ISLIHRIRSCIKKHGKQTDFRVSKSSCLGRCGEGPTLVVYPDGIWYQRVNENDAEEIVTEHLFNDRLVARLVDNIMQ

Sequences:

>Translated_397_residues
MSRNILGIFIVGHGSRDLSSSAEFEAFVEGYRKLHPEYEIDIGYVELAEPVFKTALLEFAKTRNRILIFPLFLFASNHVK
NDIPLVLSDLKEKFPDHQFISAMPLGIHENITKLLSIRSKESGIFKEESKSKTGVIVVSRGASDADSNGNFYKAVRFFEE
SNSFLFVKPSFIGITKPLLHESIEMSAKLRPDRLLILPYFLFNGKLIQKISYITKEYSLKYPWIKIETASHFGPDPILYP
ILDERIAQALSGKDALPCDNCEYRVSIPGLKNKVGGLNSLLWSMRHLETHTQAAPHEFPHRNLIKHVYICESTNCASKGS
ISLIHRIRSCIKKHGKQTDFRVSKSSCLGRCGEGPTLVVYPDGIWYQRVNENDAEEIVTEHLFNDRLVARLVDNIMQ
>Mature_396_residues
SRNILGIFIVGHGSRDLSSSAEFEAFVEGYRKLHPEYEIDIGYVELAEPVFKTALLEFAKTRNRILIFPLFLFASNHVKN
DIPLVLSDLKEKFPDHQFISAMPLGIHENITKLLSIRSKESGIFKEESKSKTGVIVVSRGASDADSNGNFYKAVRFFEES
NSFLFVKPSFIGITKPLLHESIEMSAKLRPDRLLILPYFLFNGKLIQKISYITKEYSLKYPWIKIETASHFGPDPILYPI
LDERIAQALSGKDALPCDNCEYRVSIPGLKNKVGGLNSLLWSMRHLETHTQAAPHEFPHRNLIKHVYICESTNCASKGSI
SLIHRIRSCIKKHGKQTDFRVSKSSCLGRCGEGPTLVVYPDGIWYQRVNENDAEEIVTEHLFNDRLVARLVDNIMQ

Specific function: Chelates cobalt to the cobalamin precursor as part of the anaerobic pathway to cobalamin biosynthesis [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. CbiXL subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.3 [H]

Molecular weight: Translated: 45088; Mature: 44956

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNILGIFIVGHGSRDLSSSAEFEAFVEGYRKLHPEYEIDIGYVELAEPVFKTALLEFA
CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH
KTRNRILIFPLFLFASNHVKNDIPLVLSDLKEKFPDHQFISAMPLGIHENITKLLSIRSK
HCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCC
ESGIFKEESKSKTGVIVVSRGASDADSNGNFYKAVRFFEESNSFLFVKPSFIGITKPLLH
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHCCHHHHH
ESIEMSAKLRPDRLLILPYFLFNGKLIQKISYITKEYSLKYPWIKIETASHFGPDPILYP
HHHHHHCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEHH
ILDERIAQALSGKDALPCDNCEYRVSIPGLKNKVGGLNSLLWSMRHLETHTQAAPHEFPH
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCC
RNLIKHVYICESTNCASKGSISLIHRIRSCIKKHGKQTDFRVSKSSCLGRCGEGPTLVVY
HHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHCCCCCCEEEEE
PDGIWYQRVNENDAEEIVTEHLFNDRLVARLVDNIMQ
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRNILGIFIVGHGSRDLSSSAEFEAFVEGYRKLHPEYEIDIGYVELAEPVFKTALLEFA
CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH
KTRNRILIFPLFLFASNHVKNDIPLVLSDLKEKFPDHQFISAMPLGIHENITKLLSIRSK
HCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCC
ESGIFKEESKSKTGVIVVSRGASDADSNGNFYKAVRFFEESNSFLFVKPSFIGITKPLLH
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHCCHHHHH
ESIEMSAKLRPDRLLILPYFLFNGKLIQKISYITKEYSLKYPWIKIETASHFGPDPILYP
HHHHHHCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEHH
ILDERIAQALSGKDALPCDNCEYRVSIPGLKNKVGGLNSLLWSMRHLETHTQAAPHEFPH
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCC
RNLIKHVYICESTNCASKGSISLIHRIRSCIKKHGKQTDFRVSKSSCLGRCGEGPTLVVY
HHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHCCCCCCEEEEE
PDGIWYQRVNENDAEEIVTEHLFNDRLVARLVDNIMQ
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9742225; 12917443 [H]