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The map label for this gene is rfbU [H]

Identifier: 116332581

GI number: 116332581

Start: 174570

End: 175706

Strand: Reverse

Name: rfbU [H]

Synonym: LBJ_4153

Alternate gene names: 116332581

Gene position: 175706-174570 (Counterclockwise)

Preceding gene: 116332582

Following gene: 116332580

Centisome position: 58.62

GC content: 42.04

Gene sequence:

>1137_bases
ATGCCGATCCGAACCAACGAACTTAAATATAAACCTAGAGTGGGGGTGGATGTTCGCCCCCTTGCTTATGGGATTACCGG
GAACTCCAGGTATCTTGCGGAAGTTTTAAGAAGATTGATTACAAATGAATCTCCTCTGGAGTATTATCTTTATTCGAACA
AACCGATTCGTAGCGTATTTTATGATATTCTTTCAAACGTAAATTCCCGTTTTTTTATGGCCGGTAAACTCCCCGGATTT
GCCTGGTTGAATTGGACGATTCCTAAACGGATCAAAAAGGACAGATTGGATCTCTTTTGGGGAACTCTTCAATTACTTCC
TCTTTCTTGTGGAAACGTTTTAACCGCCGTGAACTATCACGATCTTAACTTTCGTTCCGCACCTCAAACGATGACGACCG
CAAATCTTTGGCAACATAGGATTTTTTCACCGAAGACGTTAAACAGAGCCGATCTTGTGTTTTGTCTTTCCGAAAACACT
CGCCGGGACATCCTAAAATTCAAAACGGATCTAAGTCCAAAATTGAAAGTTGTATATCCCGGAGTGGAATCCTTTCCTTC
CATACGTGAGCCTCTGCGTCAAATTTTTGGAAATTTCTTATTTACCATTGGAACTTTGGAACCTAGAAAAAATTTAAGAA
CTCTGATCGATGCATATCGAAAACTCAAAAAACAGAATTCTTCCTATCCTTTCTCTCTTGTGATAGCCGGCCGTTTGGGT
TGGAAATCGGAGGGGCTGACCCAACTTTTAAAGGAAGGAAGCCTGGAATCGGAAGGGATCCTTTTTATAGAGAATCCTAC
GGACGAGGTGCTTGCTTGGCTTTATAGAAAATGTTCCGCTTTTTTATTCCCATCCGTTCACGAGGGTTTCGGTCTTCCTT
TGTTAGAGGCGCTTCGAGAAGGAAAGGTCTGCGTCGCTTCCGATATTCCGGTATTTCATGAAATTTTGGAACGAAATGTG
GATTTGTTTGCGGAACCTTTGGATGTAGATGCCTGGGTTTCTTCCCTGTCGGAGTTACAACATAAAAAATTACAAAGATC
TTCCGTTTGGGATGCGTCTCAGTGGACTTGGGATCTGACCGCGAAAAGAATCGAAGAAGGTTTGATTGATCTTTGGAAAC
ATAGAAAGGAACTATAG

Upstream 100 bases:

>100_bases
TATCTTTTATACTTTGCCATCTTTCAATATGTTTTGCTTTTGTTCGCTTTGAAATATGAGTCTGAGGCTCGGAAAATAAG
CTTGAATACGACTGGAACTG

Downstream 100 bases:

>100_bases
CACTAAGAATATGAGACAGAACGAAAAAAGAATTTATTCGGGATGGGAGCTTTTAAATGCAAACGAAGTTTCTTCTGGAA
CTCCGATTCGTCTGAAAATC

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MPIRTNELKYKPRVGVDVRPLAYGITGNSRYLAEVLRRLITNESPLEYYLYSNKPIRSVFYDILSNVNSRFFMAGKLPGF
AWLNWTIPKRIKKDRLDLFWGTLQLLPLSCGNVLTAVNYHDLNFRSAPQTMTTANLWQHRIFSPKTLNRADLVFCLSENT
RRDILKFKTDLSPKLKVVYPGVESFPSIREPLRQIFGNFLFTIGTLEPRKNLRTLIDAYRKLKKQNSSYPFSLVIAGRLG
WKSEGLTQLLKEGSLESEGILFIENPTDEVLAWLYRKCSAFLFPSVHEGFGLPLLEALREGKVCVASDIPVFHEILERNV
DLFAEPLDVDAWVSSLSELQHKKLQRSSVWDASQWTWDLTAKRIEEGLIDLWKHRKEL

Sequences:

>Translated_378_residues
MPIRTNELKYKPRVGVDVRPLAYGITGNSRYLAEVLRRLITNESPLEYYLYSNKPIRSVFYDILSNVNSRFFMAGKLPGF
AWLNWTIPKRIKKDRLDLFWGTLQLLPLSCGNVLTAVNYHDLNFRSAPQTMTTANLWQHRIFSPKTLNRADLVFCLSENT
RRDILKFKTDLSPKLKVVYPGVESFPSIREPLRQIFGNFLFTIGTLEPRKNLRTLIDAYRKLKKQNSSYPFSLVIAGRLG
WKSEGLTQLLKEGSLESEGILFIENPTDEVLAWLYRKCSAFLFPSVHEGFGLPLLEALREGKVCVASDIPVFHEILERNV
DLFAEPLDVDAWVSSLSELQHKKLQRSSVWDASQWTWDLTAKRIEEGLIDLWKHRKEL
>Mature_377_residues
PIRTNELKYKPRVGVDVRPLAYGITGNSRYLAEVLRRLITNESPLEYYLYSNKPIRSVFYDILSNVNSRFFMAGKLPGFA
WLNWTIPKRIKKDRLDLFWGTLQLLPLSCGNVLTAVNYHDLNFRSAPQTMTTANLWQHRIFSPKTLNRADLVFCLSENTR
RDILKFKTDLSPKLKVVYPGVESFPSIREPLRQIFGNFLFTIGTLEPRKNLRTLIDAYRKLKKQNSSYPFSLVIAGRLGW
KSEGLTQLLKEGSLESEGILFIENPTDEVLAWLYRKCSAFLFPSVHEGFGLPLLEALREGKVCVASDIPVFHEILERNVD
LFAEPLDVDAWVSSLSELQHKKLQRSSVWDASQWTWDLTAKRIEEGLIDLWKHRKEL

Specific function: May Be A Glycosyltransferase Involved In The Transfer Of UDP-Galf And UDP-Glucose. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43711; Mature: 43580

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIRTNELKYKPRVGVDVRPLAYGITGNSRYLAEVLRRLITNESPLEYYLYSNKPIRSVF
CCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
YDILSNVNSRFFMAGKLPGFAWLNWTIPKRIKKDRLDLFWGTLQLLPLSCGNVLTAVNYH
HHHHHCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
DLNFRSAPQTMTTANLWQHRIFSPKTLNRADLVFCLSENTRRDILKFKTDLSPKLKVVYP
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEC
GVESFPSIREPLRQIFGNFLFTIGTLEPRKNLRTLIDAYRKLKKQNSSYPFSLVIAGRLG
CHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
WKSEGLTQLLKEGSLESEGILFIENPTDEVLAWLYRKCSAFLFPSVHEGFGLPLLEALRE
CCHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHC
GKVCVASDIPVFHEILERNVDLFAEPLDVDAWVSSLSELQHKKLQRSSVWDASQWTWDLT
CCEEEECCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
AKRIEEGLIDLWKHRKEL
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PIRTNELKYKPRVGVDVRPLAYGITGNSRYLAEVLRRLITNESPLEYYLYSNKPIRSVF
CCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
YDILSNVNSRFFMAGKLPGFAWLNWTIPKRIKKDRLDLFWGTLQLLPLSCGNVLTAVNYH
HHHHHCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
DLNFRSAPQTMTTANLWQHRIFSPKTLNRADLVFCLSENTRRDILKFKTDLSPKLKVVYP
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEC
GVESFPSIREPLRQIFGNFLFTIGTLEPRKNLRTLIDAYRKLKKQNSSYPFSLVIAGRLG
CHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
WKSEGLTQLLKEGSLESEGILFIENPTDEVLAWLYRKCSAFLFPSVHEGFGLPLLEALRE
CCHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHC
GKVCVASDIPVFHEILERNVDLFAEPLDVDAWVSSLSELQHKKLQRSSVWDASQWTWDLT
CCEEEECCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
AKRIEEGLIDLWKHRKEL
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]