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The map label for this gene is 116332555

Identifier: 116332555

GI number: 116332555

Start: 138524

End: 141127

Strand: Reverse

Name: 116332555

Synonym: LBJ_4121

Alternate gene names: NA

Gene position: 141127-138524 (Counterclockwise)

Preceding gene: 116332556

Following gene: 116332554

Centisome position: 47.08

GC content: 43.16

Gene sequence:

>2604_bases
ATGAAAATCATTAAAACCATATTAGTCATTCTTCGTGCCGTATCAATTGAGCGATTCGTAACGTTGAAAAAACGAATTTC
GTTTTTATTTCTTATCTTTCTTACGGTTCCGACCATGGAAGTATTTGCGGAAGTCTCTTTTCGTGCCCGTGTTTATTCTC
GTAGTAAAAATTCGGGAGAGGCAAATGTAAGGGTTCTGCTTTTTGAAACCAAAAAGTTCTACCAGACCGATGTGGAAGGA
TATTTTCAAGCGGTGGCCCCTTCTTCCGGTGTTTATACGTTTCGCATTTTAAAAGATACAGGGGCTCAGGAAATTCGCAA
AGAAATCGGAGAAGGAGAGGAACTTGTCATTCTTGATTCCGATCAATCCACCAAAAGTGGCGGCGGTGGATCGAAAGGTT
CAATCAACGTAACCGGAGAGCGGGAAAAACAACTCATGTCTCGCACCAAACTCCGCTTTGAGGAAATCAAGCGAATGCCC
GGTACTTTCGGAGAACCGCTCCGTTCGATCGAAACAATTCCTGGAGTCGTTCCTGTTTCCGCTTTCGGGGGTGGTGCAAG
TAACTACTCCTTCCGAGGCGCAGATCCGACTACGAATCTTTATCTTTACGACGATCTTCCGATTTTATACCCGTTTCACT
TTGACGGTTTGACCGGTACGCTTAACGGAAACTTAATCAAATCGATGGACGTTTATACGGGAGTTCTCCCCGCAAACTTC
AACAACGCGTTAGGAGGGGTAATCGAAATCGAATCTCCCGATAAAGTGGAACGGTCCAGCGGAAATTTTTTGTCTTCTCT
CTGGGCCGCCTCCGCAAATTACCAAACCACTTTTGCGAATGGAAAAGGTTATATCCTAGGAGCTGTGAAAGTCGGTTATA
TGGATAAAACATTTGAGACTATTGGAACAATTACAGGCGTTAGTTCTCTTCCAGACGGGGTACGCTTACCGCATTATACA
GATTCTCAAGTAAAAATGGTTTATAACTTTAACGATCAGCACCAGATTTCGTTCTATTCTTTGACTGCAAAAGACGATAC
CGCATTCAATCCTCCCGTAAAAAGATACAACGACCCTACCAAAGACCAATTTGCCGAATATTCGGGCGGAAATCTTTCGG
TGGGCCAAGGTTATCGTACGCAAGCCTTACGTTATATTTGGAGACCTTCCGAAAAATTCGTAAATCGGATCACCTTGATT
AGTTACGATCCGTTTGTGGATTACAACGTTTTGTTCGGTTCCCTAAAAGCAAAACAAAAAGCGAGCGGCGCTTACAACGG
GATTCGACAAGATGCTTATTGGGATCCAAATAAGCACTTAACGTTGGAATTCGGTTCCGAAATGCGATTTCTCAACTATA
GAACTTCGGGGAATACGATCCAACAGACCGATCCGAATAATCCGGATCCGAATCCGTATGATACGGTGACTCCCGACTTT
AAAACCGTTTCGGACACAAACCGAGTACAAAGCAAATACTACAACGCTTATACGACGATGAAAATTAAATTCGGCGGATT
ACTCATCGAACCCGGAGCCAGATACGATTATATTCCTTACATCAAAAACGGCGCTCTCGGTCCCAAAGCACAAATGTCTT
ATAAGTTTGAAGAAGGCCCTCTCAAAGGGATTACCGTTTTCGGAGGTGCGGGAAATCATTTTAACTTTCCGTTAGATACC
CGCTTTTCCGAACAAAGCGGAAACCCTCACCTGAAATTTCAAAAAGCGTTTAAATACGGCGGAGGAGTTGAACATGAACT
CACTTCCAATTGGCAAGCTAAAGGTGAAGTCTTTAAACAAGAATTCTCCAACTTGATCGTAACCGATCCTTATATTACGG
AGATTATCGGAACGAATCCGGATCAGTACGGAAAAGTCTTTCAACCTTACATTCTCAATAAACCTCTCAATTATTCGAAT
AATGGGACCGGGCACTCTCAAGGTTACGAGCTCTTAATCCGTAAAATTGCGACTCCCGGAAAGAGGGATGATTGGTTCGG
TTGGATCTCTTACACTTGGTCTCAAACATTTAGAAATCCTAATATTTATAAACCTGACGGAATGATAGCTCCTGTTGCTA
CCGGACCGGAACAAAGATTGCTCGCTCAATCTTATCATAACTCGAAGGAAACCTTATATGATTACGACCGTACTCATATC
ATCAACGTAGTTTTCGGTTGGAAATTCAGCCAGAATTGGCAACTTGGCGGAAGATGGTCTTACTTAACTTCCATGCCAAT
CACTCCGATTGTAGGAGACGACGGCGGTAGATTTTCTAATCCGGCGAACAATCAAACAATCTGGGCGCCGGTTTCAGCAA
ACAATCCGTATCTTGCCGACTATGTCAACACGAAACGTCTTGCGGATTATCATAGATTTGATATTCGAATCGATAAATTC
TTAAATTACGAATGGGGCTATGTAAACACGTTCTTCGAAATTATCAACGTCTACATGCGGCAGAACGTTTCTGGAGAAAC
TTTTAACGTTACGCGTCCTTATTCTTCTACAAACCCGAAACCGAGTCCGACATTCGGTACCATTACATTATCGGGCGGGG
TGGTTATCCCGTTCTTTAACATAGGGATCGAGGTGAAGTTCTAA

Upstream 100 bases:

>100_bases
GCTTGTGTTCTAATCTATGTGGATAATCCCATCGGCGATATACCTTGGTATATAAACTTTCAGGAAGTATTCGTAAAAAT
TAAATTATAGTAAGGCGACG

Downstream 100 bases:

>100_bases
TGAAAAAGAATCCGTTCACTATTTTGTGGAAGCACTTTTCGTATTTCCTACTTGTATTCCTTTTGATTTTGGATTGTAAC
CTCCCGAACGAAAGCAATAG

Product: TonB dependent receptor

Products: NA

Alternate protein names: NB Dependent Receptor; NB-Dependent Receptor Plug; Nb Family Protein; NB Domain-Containing Protein

Number of amino acids: Translated: 867; Mature: 867

Protein sequence:

>867_residues
MKIIKTILVILRAVSIERFVTLKKRISFLFLIFLTVPTMEVFAEVSFRARVYSRSKNSGEANVRVLLFETKKFYQTDVEG
YFQAVAPSSGVYTFRILKDTGAQEIRKEIGEGEELVILDSDQSTKSGGGGSKGSINVTGEREKQLMSRTKLRFEEIKRMP
GTFGEPLRSIETIPGVVPVSAFGGGASNYSFRGADPTTNLYLYDDLPILYPFHFDGLTGTLNGNLIKSMDVYTGVLPANF
NNALGGVIEIESPDKVERSSGNFLSSLWAASANYQTTFANGKGYILGAVKVGYMDKTFETIGTITGVSSLPDGVRLPHYT
DSQVKMVYNFNDQHQISFYSLTAKDDTAFNPPVKRYNDPTKDQFAEYSGGNLSVGQGYRTQALRYIWRPSEKFVNRITLI
SYDPFVDYNVLFGSLKAKQKASGAYNGIRQDAYWDPNKHLTLEFGSEMRFLNYRTSGNTIQQTDPNNPDPNPYDTVTPDF
KTVSDTNRVQSKYYNAYTTMKIKFGGLLIEPGARYDYIPYIKNGALGPKAQMSYKFEEGPLKGITVFGGAGNHFNFPLDT
RFSEQSGNPHLKFQKAFKYGGGVEHELTSNWQAKGEVFKQEFSNLIVTDPYITEIIGTNPDQYGKVFQPYILNKPLNYSN
NGTGHSQGYELLIRKIATPGKRDDWFGWISYTWSQTFRNPNIYKPDGMIAPVATGPEQRLLAQSYHNSKETLYDYDRTHI
INVVFGWKFSQNWQLGGRWSYLTSMPITPIVGDDGGRFSNPANNQTIWAPVSANNPYLADYVNTKRLADYHRFDIRIDKF
LNYEWGYVNTFFEIINVYMRQNVSGETFNVTRPYSSTNPKPSPTFGTITLSGGVVIPFFNIGIEVKF

Sequences:

>Translated_867_residues
MKIIKTILVILRAVSIERFVTLKKRISFLFLIFLTVPTMEVFAEVSFRARVYSRSKNSGEANVRVLLFETKKFYQTDVEG
YFQAVAPSSGVYTFRILKDTGAQEIRKEIGEGEELVILDSDQSTKSGGGGSKGSINVTGEREKQLMSRTKLRFEEIKRMP
GTFGEPLRSIETIPGVVPVSAFGGGASNYSFRGADPTTNLYLYDDLPILYPFHFDGLTGTLNGNLIKSMDVYTGVLPANF
NNALGGVIEIESPDKVERSSGNFLSSLWAASANYQTTFANGKGYILGAVKVGYMDKTFETIGTITGVSSLPDGVRLPHYT
DSQVKMVYNFNDQHQISFYSLTAKDDTAFNPPVKRYNDPTKDQFAEYSGGNLSVGQGYRTQALRYIWRPSEKFVNRITLI
SYDPFVDYNVLFGSLKAKQKASGAYNGIRQDAYWDPNKHLTLEFGSEMRFLNYRTSGNTIQQTDPNNPDPNPYDTVTPDF
KTVSDTNRVQSKYYNAYTTMKIKFGGLLIEPGARYDYIPYIKNGALGPKAQMSYKFEEGPLKGITVFGGAGNHFNFPLDT
RFSEQSGNPHLKFQKAFKYGGGVEHELTSNWQAKGEVFKQEFSNLIVTDPYITEIIGTNPDQYGKVFQPYILNKPLNYSN
NGTGHSQGYELLIRKIATPGKRDDWFGWISYTWSQTFRNPNIYKPDGMIAPVATGPEQRLLAQSYHNSKETLYDYDRTHI
INVVFGWKFSQNWQLGGRWSYLTSMPITPIVGDDGGRFSNPANNQTIWAPVSANNPYLADYVNTKRLADYHRFDIRIDKF
LNYEWGYVNTFFEIINVYMRQNVSGETFNVTRPYSSTNPKPSPTFGTITLSGGVVIPFFNIGIEVKF
>Mature_867_residues
MKIIKTILVILRAVSIERFVTLKKRISFLFLIFLTVPTMEVFAEVSFRARVYSRSKNSGEANVRVLLFETKKFYQTDVEG
YFQAVAPSSGVYTFRILKDTGAQEIRKEIGEGEELVILDSDQSTKSGGGGSKGSINVTGEREKQLMSRTKLRFEEIKRMP
GTFGEPLRSIETIPGVVPVSAFGGGASNYSFRGADPTTNLYLYDDLPILYPFHFDGLTGTLNGNLIKSMDVYTGVLPANF
NNALGGVIEIESPDKVERSSGNFLSSLWAASANYQTTFANGKGYILGAVKVGYMDKTFETIGTITGVSSLPDGVRLPHYT
DSQVKMVYNFNDQHQISFYSLTAKDDTAFNPPVKRYNDPTKDQFAEYSGGNLSVGQGYRTQALRYIWRPSEKFVNRITLI
SYDPFVDYNVLFGSLKAKQKASGAYNGIRQDAYWDPNKHLTLEFGSEMRFLNYRTSGNTIQQTDPNNPDPNPYDTVTPDF
KTVSDTNRVQSKYYNAYTTMKIKFGGLLIEPGARYDYIPYIKNGALGPKAQMSYKFEEGPLKGITVFGGAGNHFNFPLDT
RFSEQSGNPHLKFQKAFKYGGGVEHELTSNWQAKGEVFKQEFSNLIVTDPYITEIIGTNPDQYGKVFQPYILNKPLNYSN
NGTGHSQGYELLIRKIATPGKRDDWFGWISYTWSQTFRNPNIYKPDGMIAPVATGPEQRLLAQSYHNSKETLYDYDRTHI
INVVFGWKFSQNWQLGGRWSYLTSMPITPIVGDDGGRFSNPANNQTIWAPVSANNPYLADYVNTKRLADYHRFDIRIDKF
LNYEWGYVNTFFEIINVYMRQNVSGETFNVTRPYSSTNPKPSPTFGTITLSGGVVIPFFNIGIEVKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97702; Mature: 97702

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIKTILVILRAVSIERFVTLKKRISFLFLIFLTVPTMEVFAEVSFRARVYSRSKNSGE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCCCC
ANVRVLLFETKKFYQTDVEGYFQAVAPSSGVYTFRILKDTGAQEIRKEIGEGEELVILDS
CEEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEEC
DQSTKSGGGGSKGSINVTGEREKQLMSRTKLRFEEIKRMPGTFGEPLRSIETIPGVVPVS
CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEE
AFGGGASNYSFRGADPTTNLYLYDDLPILYPFHFDGLTGTLNGNLIKSMDVYTGVLPANF
CCCCCCCCCCEECCCCCCEEEEEECCCEEEEEEECCEEEECCCCEEEEHHHHCCCCCCCC
NNALGGVIEIESPDKVERSSGNFLSSLWAASANYQTTFANGKGYILGAVKVGYMDKTFET
CCCCCCEEEECCCCCHHCCCCCHHHHHHHCCCCCEEEEECCCEEEEEEEEECCCHHHHHH
IGTITGVSSLPDGVRLPHYTDSQVKMVYNFNDQHQISFYSLTAKDDTAFNPPVKRYNDPT
HHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHCCCCC
KDQFAEYSGGNLSVGQGYRTQALRYIWRPSEKFVNRITLISYDPFVDYNVLFGSLKAKQK
HHHHHHCCCCCEEECCCHHHHHHHHHCCCCHHHHCEEEEEEECCCCCHHHHEECHHHHHH
ASGAYNGIRQDAYWDPNKHLTLEFGSEMRFLNYRTSGNTIQQTDPNNPDPNPYDTVTPDF
HCCHHCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCC
KTVSDTNRVQSKYYNAYTTMKIKFGGLLIEPGARYDYIPYIKNGALGPKAQMSYKFEEGP
CCCCCHHHHHHHHCCEEEEEEEEECCEEECCCCCCCCCCEECCCCCCCCCCEEEEECCCC
LKGITVFGGAGNHFNFPLDTRFSEQSGNPHLKFQKAFKYGGGVEHELTSNWQAKGEVFKQ
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCHHCCCCCHHHHHHHH
EFSNLIVTDPYITEIIGTNPDQYGKVFQPYILNKPLNYSNNGTGHSQGYELLIRKIATPG
HHCCEEEECCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
KRDDWFGWISYTWSQTFRNPNIYKPDGMIAPVATGPEQRLLAQSYHNSKETLYDYDRTHI
CCCCCEEEEEEEEHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHCCCEEE
INVVFGWKFSQNWQLGGRWSYLTSMPITPIVGDDGGRFSNPANNQTIWAPVSANNPYLAD
EEEEEEEEECCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEE
YVNTKRLADYHRFDIRIDKFLNYEWGYVNTFFEIINVYMRQNVSGETFNVTRPYSSTNPK
CCCHHHHHHHHEEEEEEEHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
PSPTFGTITLSGGVVIPFFNIGIEVKF
CCCCEEEEEECCCEEEEEEEECEEEEC
>Mature Secondary Structure
MKIIKTILVILRAVSIERFVTLKKRISFLFLIFLTVPTMEVFAEVSFRARVYSRSKNSGE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCCCC
ANVRVLLFETKKFYQTDVEGYFQAVAPSSGVYTFRILKDTGAQEIRKEIGEGEELVILDS
CEEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEEC
DQSTKSGGGGSKGSINVTGEREKQLMSRTKLRFEEIKRMPGTFGEPLRSIETIPGVVPVS
CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEE
AFGGGASNYSFRGADPTTNLYLYDDLPILYPFHFDGLTGTLNGNLIKSMDVYTGVLPANF
CCCCCCCCCCEECCCCCCEEEEEECCCEEEEEEECCEEEECCCCEEEEHHHHCCCCCCCC
NNALGGVIEIESPDKVERSSGNFLSSLWAASANYQTTFANGKGYILGAVKVGYMDKTFET
CCCCCCEEEECCCCCHHCCCCCHHHHHHHCCCCCEEEEECCCEEEEEEEEECCCHHHHHH
IGTITGVSSLPDGVRLPHYTDSQVKMVYNFNDQHQISFYSLTAKDDTAFNPPVKRYNDPT
HHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHCCCCC
KDQFAEYSGGNLSVGQGYRTQALRYIWRPSEKFVNRITLISYDPFVDYNVLFGSLKAKQK
HHHHHHCCCCCEEECCCHHHHHHHHHCCCCHHHHCEEEEEEECCCCCHHHHEECHHHHHH
ASGAYNGIRQDAYWDPNKHLTLEFGSEMRFLNYRTSGNTIQQTDPNNPDPNPYDTVTPDF
HCCHHCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCC
KTVSDTNRVQSKYYNAYTTMKIKFGGLLIEPGARYDYIPYIKNGALGPKAQMSYKFEEGP
CCCCCHHHHHHHHCCEEEEEEEEECCEEECCCCCCCCCCEECCCCCCCCCCEEEEECCCC
LKGITVFGGAGNHFNFPLDTRFSEQSGNPHLKFQKAFKYGGGVEHELTSNWQAKGEVFKQ
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCHHCCCCCHHHHHHHH
EFSNLIVTDPYITEIIGTNPDQYGKVFQPYILNKPLNYSNNGTGHSQGYELLIRKIATPG
HHCCEEEECCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
KRDDWFGWISYTWSQTFRNPNIYKPDGMIAPVATGPEQRLLAQSYHNSKETLYDYDRTHI
CCCCCEEEEEEEEHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHCCCEEE
INVVFGWKFSQNWQLGGRWSYLTSMPITPIVGDDGGRFSNPANNQTIWAPVSANNPYLAD
EEEEEEEEECCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCEEEE
YVNTKRLADYHRFDIRIDKFLNYEWGYVNTFFEIINVYMRQNVSGETFNVTRPYSSTNPK
CCCHHHHHHHHEEEEEEEHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
PSPTFGTITLSGGVVIPFFNIGIEVKF
CCCCEEEEEECCCEEEEEEEECEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA