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The map label for this gene is 116332500

Identifier: 116332500

GI number: 116332500

Start: 60965

End: 61777

Strand: Reverse

Name: 116332500

Synonym: LBJ_4058

Alternate gene names: NA

Gene position: 61777-60965 (Counterclockwise)

Preceding gene: 116332503

Following gene: 116332497

Centisome position: 20.61

GC content: 42.8

Gene sequence:

>813_bases
ATGATAGTCATTCTATCTTTCTTTATCGGGCATTGGTTCTTATCGGCTTTTGTCCAATCGTTTTTTTTACACAGATATGC
AGCCCATGCAATGTTTAAGATGAATAAGTTTTGGGAAAAGTTTTTTCACATTTTCACTTGCGTGGCTCAAGGCTCCTCGT
TCTTAAACCCGCGTGCTTATGCGATCATGCATAGACAACACCATGCGTACAGCGATACCGGAAAAGATCCCCATTCTCCG
GTCGCCTCTAAAGGATTTCTGGACATGATGTGGAGAACCGCACTCAATTATGAAGCGATCTTAGATAAAAAAGCGAATGT
AGAAAAAGAATTTAGAGGCAACTACCCCGAGTGGCCGGCAATCGACAAACTCAGCGATTCCTGGACTTTCAGATTGTTTT
GCGGAACCCTTTACACGTTATTCTATCTTTACTTCGTTCCCGCAGGACAGTACGGATGGTATCTGCTACTTCCAATCCAC
TGGGTGATGGGACCGCTTCACGGTGCGATCGTAAACTGGTGCGGACATATGTACGGTTATAGAAATCATAAAAAAAATCC
GGATAATTCAAAGAACACGCTGTTTGTGGATTTTATGATCGCAGGCGAATTGTATCAAAACAATCACCATGCTCATCCCA
ATTCTCCGAACTTTGCGTTCCGCTGGTTCGAACTGGATCTTACGTATCAAGTAATGAAGGTCCTTCACTTCTTGAAAATT
ATCAAAATTCAAAGAGCGATTTGGACTTCAAAAGGAAAAAAAATACTCCGAGGGTCCGATGTTTCCATCGAACCGGCATC
CGTAGCAGCCTAA

Upstream 100 bases:

>100_bases
AAAAATCAAAAAAATTGCTCTTTTTTCGAAATAATCCGCAACTTTCCTGCAACCTGCACAATACAAACCGCTCATAGTAT
TCAACAGGAGTGAATACCAA

Downstream 100 bases:

>100_bases
ACGAACAGTCCTAAGATAAAGCCCGCGGCAAACCAAGCGCGCGGGCTTTTTTGCTCAGCTGCAATCCTGTTCAGCTTGAG
ACATTCTGACCTTCCACTCC

Product: Fatty-acid desaturase

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Fatty-Acid Desaturase; Fatty Acid Desaturase Family Protein; Delta-9 Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Subfamily; Acyl-CoA Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Transmembrane Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MIVILSFFIGHWFLSAFVQSFFLHRYAAHAMFKMNKFWEKFFHIFTCVAQGSSFLNPRAYAIMHRQHHAYSDTGKDPHSP
VASKGFLDMMWRTALNYEAILDKKANVEKEFRGNYPEWPAIDKLSDSWTFRLFCGTLYTLFYLYFVPAGQYGWYLLLPIH
WVMGPLHGAIVNWCGHMYGYRNHKKNPDNSKNTLFVDFMIAGELYQNNHHAHPNSPNFAFRWFELDLTYQVMKVLHFLKI
IKIQRAIWTSKGKKILRGSDVSIEPASVAA

Sequences:

>Translated_270_residues
MIVILSFFIGHWFLSAFVQSFFLHRYAAHAMFKMNKFWEKFFHIFTCVAQGSSFLNPRAYAIMHRQHHAYSDTGKDPHSP
VASKGFLDMMWRTALNYEAILDKKANVEKEFRGNYPEWPAIDKLSDSWTFRLFCGTLYTLFYLYFVPAGQYGWYLLLPIH
WVMGPLHGAIVNWCGHMYGYRNHKKNPDNSKNTLFVDFMIAGELYQNNHHAHPNSPNFAFRWFELDLTYQVMKVLHFLKI
IKIQRAIWTSKGKKILRGSDVSIEPASVAA
>Mature_270_residues
MIVILSFFIGHWFLSAFVQSFFLHRYAAHAMFKMNKFWEKFFHIFTCVAQGSSFLNPRAYAIMHRQHHAYSDTGKDPHSP
VASKGFLDMMWRTALNYEAILDKKANVEKEFRGNYPEWPAIDKLSDSWTFRLFCGTLYTLFYLYFVPAGQYGWYLLLPIH
WVMGPLHGAIVNWCGHMYGYRNHKKNPDNSKNTLFVDFMIAGELYQNNHHAHPNSPNFAFRWFELDLTYQVMKVLHFLKI
IKIQRAIWTSKGKKILRGSDVSIEPASVAA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31650; Mature: 31650

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVILSFFIGHWFLSAFVQSFFLHRYAAHAMFKMNKFWEKFFHIFTCVAQGSSFLNPRAY
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
AIMHRQHHAYSDTGKDPHSPVASKGFLDMMWRTALNYEAILDKKANVEKEFRGNYPEWPA
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHCCCCCCCCC
IDKLSDSWTFRLFCGTLYTLFYLYFVPAGQYGWYLLLPIHWVMGPLHGAIVNWCGHMYGY
CCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC
RNHKKNPDNSKNTLFVDFMIAGELYQNNHHAHPNSPNFAFRWFELDLTYQVMKVLHFLKI
CCCCCCCCCCCCEEEEEEEEECHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHH
IKIQRAIWTSKGKKILRGSDVSIEPASVAA
HHHHHHHHHHCCCEEECCCCCCCCCHHCCC
>Mature Secondary Structure
MIVILSFFIGHWFLSAFVQSFFLHRYAAHAMFKMNKFWEKFFHIFTCVAQGSSFLNPRAY
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
AIMHRQHHAYSDTGKDPHSPVASKGFLDMMWRTALNYEAILDKKANVEKEFRGNYPEWPA
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHCCCCCCCCC
IDKLSDSWTFRLFCGTLYTLFYLYFVPAGQYGWYLLLPIHWVMGPLHGAIVNWCGHMYGY
CCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC
RNHKKNPDNSKNTLFVDFMIAGELYQNNHHAHPNSPNFAFRWFELDLTYQVMKVLHFLKI
CCCCCCCCCCCCEEEEEEEEECHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHH
IKIQRAIWTSKGKKILRGSDVSIEPASVAA
HHHHHHHHHHCCCEEECCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA