| Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008511 |
| Length | 299,762 |
Click here to switch to the map view.
The map label for this gene is 116332493
Identifier: 116332493
GI number: 116332493
Start: 54753
End: 55253
Strand: Reverse
Name: 116332493
Synonym: LBJ_4051
Alternate gene names: NA
Gene position: 55253-54753 (Counterclockwise)
Preceding gene: 116332496
Following gene: 116332476
Centisome position: 18.43
GC content: 39.32
Gene sequence:
>501_bases ATGAATTCCACTTTTGATTCCACTCCGTTTTATAAAATACTCTTCACAATCGGATTCGGCTCGATCTCATTCTTTTTTCC ATTCTACCTCGTCGTCTCTAGCGAAAACAAACATCTGGATCAAGTCTACCAAAGTCTGAGAGAACCCGGTCCGACCGTTT TTGGAACCCTCACGGAATCGATTCGTATAGAGAAGCCGGGAAGAAGAGCTTATCTCGTTTCTTATAGAGTTCCCGACGAA TTCGGAAAGTTATACGAAATCACGGAGCAAGTGGACGAGAATTTATATCAAAGACTTCGGGTCGGAGATAGTATAGAAGT ACGCAGACAAACTTTCAAAACTTTTGGAAAAATTCAAGTTCTGGCGAGAATTAAAAAGAATTCTTTTTTCATAAACGATT TCGACTTTTTAGAAATGTTCTCGATGATAGGACTTTGTTTTTCGGGAATTCTACTCGCAACCGGACTTTATTATCGCATT TTCAAGGATCGGGTAATTTGA
Upstream 100 bases:
>100_bases TTAATTTTCAAACTTTGTATCGAATTCATGTTCTTTTATCTGGTTGTAATAATCCGGTACAATTAGAAACTATCCGGATA GAACTCCACTCTTTGTTTCT
Downstream 100 bases:
>100_bases TAAAAAAAGGGTTTTCTTTTTGAAAGATCAACTGTACCTGATACGGTTCCATGACGTACCGCAAAGGATTCATTTCGTAC GAAATATATAAGAAATACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MNSTFDSTPFYKILFTIGFGSISFFFPFYLVVSSENKHLDQVYQSLREPGPTVFGTLTESIRIEKPGRRAYLVSYRVPDE FGKLYEITEQVDENLYQRLRVGDSIEVRRQTFKTFGKIQVLARIKKNSFFINDFDFLEMFSMIGLCFSGILLATGLYYRI FKDRVI
Sequences:
>Translated_166_residues MNSTFDSTPFYKILFTIGFGSISFFFPFYLVVSSENKHLDQVYQSLREPGPTVFGTLTESIRIEKPGRRAYLVSYRVPDE FGKLYEITEQVDENLYQRLRVGDSIEVRRQTFKTFGKIQVLARIKKNSFFINDFDFLEMFSMIGLCFSGILLATGLYYRI FKDRVI >Mature_166_residues MNSTFDSTPFYKILFTIGFGSISFFFPFYLVVSSENKHLDQVYQSLREPGPTVFGTLTESIRIEKPGRRAYLVSYRVPDE FGKLYEITEQVDENLYQRLRVGDSIEVRRQTFKTFGKIQVLARIKKNSFFINDFDFLEMFSMIGLCFSGILLATGLYYRI FKDRVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19435; Mature: 19435
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTFDSTPFYKILFTIGFGSISFFFPFYLVVSSENKHLDQVYQSLREPGPTVFGTLTES CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCCEEEEHHHH IRIEKPGRRAYLVSYRVPDEFGKLYEITEQVDENLYQRLRVGDSIEVRRQTFKTFGKIQV EEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LARIKKNSFFINDFDFLEMFSMIGLCFSGILLATGLYYRIFKDRVI HHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSTFDSTPFYKILFTIGFGSISFFFPFYLVVSSENKHLDQVYQSLREPGPTVFGTLTES CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCCEEEEHHHH IRIEKPGRRAYLVSYRVPDEFGKLYEITEQVDENLYQRLRVGDSIEVRRQTFKTFGKIQV EEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LARIKKNSFFINDFDFLEMFSMIGLCFSGILLATGLYYRIFKDRVI HHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA