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The map label for this gene is 116332485

Identifier: 116332485

GI number: 116332485

Start: 46379

End: 47209

Strand: Direct

Name: 116332485

Synonym: LBJ_4043

Alternate gene names: NA

Gene position: 46379-47209 (Clockwise)

Preceding gene: 116332484

Following gene: 116332486

Centisome position: 15.47

GC content: 42.0

Gene sequence:

>831_bases
ATGATCCGTAAAGAATTTTTATCGGTTCTTTCGAGTCTTGAATTGGGGCGTAAATCCCGATCCTTTAAGGAAAAAGTCGG
GAGTGCGGAAAGTGCCAAACGGGGAAGAGGGCTCGATTTCAAAGACGTCCGACTCTATAGTTTCGGAGACGACACTCGAC
TGATTGATTGGAACGTGACCTCTCGTTTCGGAGAATTGTATGTGCGGGAGTTTTACGAGGGAAAAGAAAGACAGGCGATT
TTATTCTATGATATATCTTCCTCGATGGAGTGGGGTACGGGGGAATGTTCCCGAGCTGAAAATGCATTCCAGGTTCTTGT
GCTCATTTCCTTGCTTTATGTACAAAAAGGGAATCGGGTCAAAATCGTTCTTTATTGCGACAAGGTGGAATGGGAAACCG
ATTTTTTAAAATCTCGCGATGAATTGCTTCCGGTGTTGCGCAAAATTTCGGATAAAAAGCTAGTCCCAAAAAGATCGAAA
CCGTTGTTCCCTTTTCAATATCTGAAAAATCGGGTCCATAGACATGCGGAGGTCTTTTTATTAAGCGACTTTATCGGAAT
TGATAACTTGAAGAAATACTCCGGTTTAAAAAAACATTATTCTTTACACGCGATTCGATTCAGAGATCCCCTAGAAATAA
ATCCACCTAAATCTTTATTATCCTTTTTTTACACACGCGATCCGGAGGAATCCAGCGGAGGACTGTTCGGTAGGAGTCTT
TCTCCCGAATTCGAATTGAAATCCTTACGTTCCTTTTTTCAGTCTTCTTTGCTGGACCTGACGGAACACGAGTTGAAAAC
CAAGGATTTGATACGGTACTTTTCGAAATGA

Upstream 100 bases:

>100_bases
GGCATAGGATCCTTCTCACGTTTGAGGCGATTTCGGAAGAATTGGATGTGGAATCTCTGATCCGGACTGTTGTGGAGGCG
ACTCCGGTTCCTTAATCTTT

Downstream 100 bases:

>100_bases
AAAAAAGTATTCAAATTATTATATATTCTTGGATTATAATATTATGCGCGGATTTAAACGCGAAAACGGTTGAATTACTT
ACCCCGGAAAAAGCGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MIRKEFLSVLSSLELGRKSRSFKEKVGSAESAKRGRGLDFKDVRLYSFGDDTRLIDWNVTSRFGELYVREFYEGKERQAI
LFYDISSSMEWGTGECSRAENAFQVLVLISLLYVQKGNRVKIVLYCDKVEWETDFLKSRDELLPVLRKISDKKLVPKRSK
PLFPFQYLKNRVHRHAEVFLLSDFIGIDNLKKYSGLKKHYSLHAIRFRDPLEINPPKSLLSFFYTRDPEESSGGLFGRSL
SPEFELKSLRSFFQSSLLDLTEHELKTKDLIRYFSK

Sequences:

>Translated_276_residues
MIRKEFLSVLSSLELGRKSRSFKEKVGSAESAKRGRGLDFKDVRLYSFGDDTRLIDWNVTSRFGELYVREFYEGKERQAI
LFYDISSSMEWGTGECSRAENAFQVLVLISLLYVQKGNRVKIVLYCDKVEWETDFLKSRDELLPVLRKISDKKLVPKRSK
PLFPFQYLKNRVHRHAEVFLLSDFIGIDNLKKYSGLKKHYSLHAIRFRDPLEINPPKSLLSFFYTRDPEESSGGLFGRSL
SPEFELKSLRSFFQSSLLDLTEHELKTKDLIRYFSK
>Mature_276_residues
MIRKEFLSVLSSLELGRKSRSFKEKVGSAESAKRGRGLDFKDVRLYSFGDDTRLIDWNVTSRFGELYVREFYEGKERQAI
LFYDISSSMEWGTGECSRAENAFQVLVLISLLYVQKGNRVKIVLYCDKVEWETDFLKSRDELLPVLRKISDKKLVPKRSK
PLFPFQYLKNRVHRHAEVFLLSDFIGIDNLKKYSGLKKHYSLHAIRFRDPLEINPPKSLLSFFYTRDPEESSGGLFGRSL
SPEFELKSLRSFFQSSLLDLTEHELKTKDLIRYFSK

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.avium MAV169 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 32329; Mature: 32329

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKEFLSVLSSLELGRKSRSFKEKVGSAESAKRGRGLDFKDVRLYSFGDDTRLIDWNVT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEECCCCEEEEECHH
SRFGELYVREFYEGKERQAILFYDISSSMEWGTGECSRAENAFQVLVLISLLYVQKGNRV
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
KIVLYCDKVEWETDFLKSRDELLPVLRKISDKKLVPKRSKPLFPFQYLKNRVHRHAEVFL
EEEEEECCCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LSDFIGIDNLKKYSGLKKHYSLHAIRFRDPLEINPPKSLLSFFYTRDPEESSGGLFGRSL
HHHHHCCCHHHHHHCHHHHHHEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
SPEFELKSLRSFFQSSLLDLTEHELKTKDLIRYFSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRKEFLSVLSSLELGRKSRSFKEKVGSAESAKRGRGLDFKDVRLYSFGDDTRLIDWNVT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEECCCCEEEEECHH
SRFGELYVREFYEGKERQAILFYDISSSMEWGTGECSRAENAFQVLVLISLLYVQKGNRV
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
KIVLYCDKVEWETDFLKSRDELLPVLRKISDKKLVPKRSKPLFPFQYLKNRVHRHAEVFL
EEEEEECCCCCHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LSDFIGIDNLKKYSGLKKHYSLHAIRFRDPLEINPPKSLLSFFYTRDPEESSGGLFGRSL
HHHHHCCCHHHHHHCHHHHHHEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
SPEFELKSLRSFFQSSLLDLTEHELKTKDLIRYFSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]