| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116329541
Identifier: 116329541
GI number: 116329541
Start: 3594717
End: 3595511
Strand: Direct
Name: 116329541
Synonym: LBL_3018
Alternate gene names: NA
Gene position: 3594717-3595511 (Clockwise)
Preceding gene: 116329537
Following gene: 116329542
Centisome position: 99.45
GC content: 38.87
Gene sequence:
>795_bases TTGCCGAAACCTTTTTGCTCCGATAAAATAAATGCTCGTCTTGAATTTTTTAAGACAAATAAAGTTATGCTACATAAATC GAGAAAAATTTTCCTAACATTCTTTCTAGTGCCATTCTTATTTCAATGTAAAGAAAAAGACTCAAATAACAATCTATTTG CCGGGCTTGGTGTGGGAAGTCCTGTTATTACTTCAATTGAACCTCCAGCCGGTTCCCCTCCTCAAACCGATGGGGTTGCT TATACTGGGACTCAGATTACGATCAAAGGAAGGAATTTTACTCCGAATTCTACGGATACGATTGTAAAATTTAACGGACT TGTGGGTACAATCTTTTCAATAACAACTACGGAAATTATTACCACTGTTCCTACCGGAGCAACTGCGGGTTTTTTAACCG TTTCAAAGGTGGACGGATTTTGCGATACGGTCAACGGAACCGACGGTTATAATTGTTCCGCGAGAAGATTCTATGTGGAT TGTTACAAGGCTTACAGTAATATTTACGGGGATGAAACCGCGATTAATTATCCGGACTCCCAAACGGTCAAATTTACGGA TGATTATTCTACAAAAGCTTTCCGTTCCAATCTTAGGGAAGCGGGAGGAACGATTCTTACTTTTGAATGTGATAACCTAA TAACAGTGAAATATTTTTCAAAGAATTGTACCGCCAATACCATAGGAACTTTCGCCGCTCCGGTTTATAACCCGACCATC AATTTTACGGAAAATTACGCGGTTCAGTATTTTATAACGACTGGAAAAGGGAGTTGTAAAATCGGCTTTCAATAG
Upstream 100 bases:
>100_bases GGTCTATTTAAAAGTAAAACCGCGATTTCTTTTTCTGTAGAATACAATATTGTGGAAGATTCGCTCATTTTAATGAACCA TTTTTTTAACAGAATAATTC
Downstream 100 bases:
>100_bases TTGATATTGTTTTTCAGAGAGCATTATTGAATCATAGTTCGTTCCATCTAATTCTCCGTAAAAAGTGTTTGGTTTTTTCC ATAAATCTGTTAGAGTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MPKPFCSDKINARLEFFKTNKVMLHKSRKIFLTFFLVPFLFQCKEKDSNNNLFAGLGVGSPVITSIEPPAGSPPQTDGVA YTGTQITIKGRNFTPNSTDTIVKFNGLVGTIFSITTTEIITTVPTGATAGFLTVSKVDGFCDTVNGTDGYNCSARRFYVD CYKAYSNIYGDETAINYPDSQTVKFTDDYSTKAFRSNLREAGGTILTFECDNLITVKYFSKNCTANTIGTFAAPVYNPTI NFTENYAVQYFITTGKGSCKIGFQ
Sequences:
>Translated_264_residues MPKPFCSDKINARLEFFKTNKVMLHKSRKIFLTFFLVPFLFQCKEKDSNNNLFAGLGVGSPVITSIEPPAGSPPQTDGVA YTGTQITIKGRNFTPNSTDTIVKFNGLVGTIFSITTTEIITTVPTGATAGFLTVSKVDGFCDTVNGTDGYNCSARRFYVD CYKAYSNIYGDETAINYPDSQTVKFTDDYSTKAFRSNLREAGGTILTFECDNLITVKYFSKNCTANTIGTFAAPVYNPTI NFTENYAVQYFITTGKGSCKIGFQ >Mature_263_residues PKPFCSDKINARLEFFKTNKVMLHKSRKIFLTFFLVPFLFQCKEKDSNNNLFAGLGVGSPVITSIEPPAGSPPQTDGVAY TGTQITIKGRNFTPNSTDTIVKFNGLVGTIFSITTTEIITTVPTGATAGFLTVSKVDGFCDTVNGTDGYNCSARRFYVDC YKAYSNIYGDETAINYPDSQTVKFTDDYSTKAFRSNLREAGGTILTFECDNLITVKYFSKNCTANTIGTFAAPVYNPTIN FTENYAVQYFITTGKGSCKIGFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29005; Mature: 28874
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPFCSDKINARLEFFKTNKVMLHKSRKIFLTFFLVPFLFQCKEKDSNNNLFAGLGVGS CCCCCCCCCCCCEEEEEECCEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCC PVITSIEPPAGSPPQTDGVAYTGTQITIKGRNFTPNSTDTIVKFNGLVGTIFSITTTEII CEEEEECCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCEEEEECCCEEEEEEEEEEEEE TTVPTGATAGFLTVSKVDGFCDTVNGTDGYNCSARRFYVDCYKAYSNIYGDETAINYPDS EECCCCCCCCEEEEEECCCEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCEEECCCC QTVKFTDDYSTKAFRSNLREAGGTILTFECDNLITVKYFSKNCTANTIGTFAAPVYNPTI CEEEEECCCCHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCCCEECCEECCCC NFTENYAVQYFITTGKGSCKIGFQ CCCCCEEEEEEEEECCCCEEECCC >Mature Secondary Structure PKPFCSDKINARLEFFKTNKVMLHKSRKIFLTFFLVPFLFQCKEKDSNNNLFAGLGVGS CCCCCCCCCCCEEEEEECCEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCC PVITSIEPPAGSPPQTDGVAYTGTQITIKGRNFTPNSTDTIVKFNGLVGTIFSITTTEII CEEEEECCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCEEEEECCCEEEEEEEEEEEEE TTVPTGATAGFLTVSKVDGFCDTVNGTDGYNCSARRFYVDCYKAYSNIYGDETAINYPDS EECCCCCCCCEEEEEECCCEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCEEECCCC QTVKFTDDYSTKAFRSNLREAGGTILTFECDNLITVKYFSKNCTANTIGTFAAPVYNPTI CEEEEECCCCHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCCCEECCEECCCC NFTENYAVQYFITTGKGSCKIGFQ CCCCCEEEEEEEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA