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The map label for this gene is 116329531

Identifier: 116329531

GI number: 116329531

Start: 3580116

End: 3581042

Strand: Direct

Name: 116329531

Synonym: LBL_3008

Alternate gene names: NA

Gene position: 3580116-3581042 (Clockwise)

Preceding gene: 116329529

Following gene: 116329532

Centisome position: 99.05

GC content: 39.48

Gene sequence:

>927_bases
TTGAAACAATCTAGATTTTCAACACACATAATTTTGTTTATCCTGACCTTCCTAACACTCACGTTTCAAAGTGAATTTTT
TGAATTACCTTTCCTATCTATTCAATCCCTAAAAGAGCTGTTTTTTCTTAGACTACCTTATTCTCTTTCTTTGATTATAA
TTCTTTCGGCTCATGAGATGGGTCATTTTTTAGCGGCTCGTTATTACGGCATTAAAGCGACTTGGCCCTATTTTATACCG
ATTCCTTTCGCTCCGATCGGAACTATGGGGGCGGTCATTCGAATCTTGGAACCAATTCGGAATAAAAAGCAACTTTTCGA
TATAGGAATTTGGGGTCCTCTGATGAGTTTGATTCTTTCCGTGCCTTGTTACATTGTAGGAATCTATTTGTCTTCTTTGG
GTCCGATTGATTCTGTGAGAGAAAATCCTGGAATCATTTCTTTTGGGGAATCTATTTTTACGATTACTATGAATCAGTGG
ATTTTAGGGCCTTTCGATCCGGCTGCTCAAGACGTTTGGATTCATCCTTTGGCGCAGGCCGGTTGGGTTGGACTTCTCGT
AACCGCCATCAATTTACTTCCGTTTGGTCAACTCGATGGAGGGCATGTAATTTATTCCGTTTTTGGTGAAAGATATAGAA
ACTGGATTTATTATCTTTTTACAGCTTTTTTGCTCTTATGCTTATGGAATTTTTCCTGGTTATTGTGGGGTTTTCTCATT
TATTTCATCATAAAAGTAGAACACCCTTTTGTCCCTGACCCGGCGGCTCCTTTGGATCGAATTCGAAAAATTGGCGGTTT
GTTGGTTTTATTTGCGCTGATTTTTATTTTTGTACCTTCTCCGATCCAACTTGGAACGAATATGAATCGACCGGGCCTTG
CCGAGGAAGTATGGATTTCGCTCAAGTCGGTTTATTCAAGTCTCTGA

Upstream 100 bases:

>100_bases
GGTGAAAGAAAGTTTTGTTTTCAGTAGAATGCTTTAAGGAAAACATTTAAAATTCATGGTAAGATGTAAAGAGGATTCTT
TTCAAGAATAGAATATACAA

Downstream 100 bases:

>100_bases
TCATTCTTCTTTTTGTAGTTTCGACTCCTGTTTTCGACCAAGATCAGGAAATCAAACTTACGGAAAACGCATATGGTCTT
ACATACGACGGTACAAATTT

Product: M50 family peptidase

Products: NA

Alternate protein names: Peptidase; Membrane-Associated Zn-Dependent Protease; M50 Family Peptidase; Metalloprotease; Membrane-Associated Metallopeptidase; Zinc Metalloprotease; Zinc Protease; M50 Family Metallopeptidase; M50B Family Peptidase; Peptidase Family; Membrane Associated Metalloprotease; S2P Family Metalloprotease; Integral Membrane Protease

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKQSRFSTHIILFILTFLTLTFQSEFFELPFLSIQSLKELFFLRLPYSLSLIIILSAHEMGHFLAARYYGIKATWPYFIP
IPFAPIGTMGAVIRILEPIRNKKQLFDIGIWGPLMSLILSVPCYIVGIYLSSLGPIDSVRENPGIISFGESIFTITMNQW
ILGPFDPAAQDVWIHPLAQAGWVGLLVTAINLLPFGQLDGGHVIYSVFGERYRNWIYYLFTAFLLLCLWNFSWLLWGFLI
YFIIKVEHPFVPDPAAPLDRIRKIGGLLVLFALIFIFVPSPIQLGTNMNRPGLAEEVWISLKSVYSSL

Sequences:

>Translated_308_residues
MKQSRFSTHIILFILTFLTLTFQSEFFELPFLSIQSLKELFFLRLPYSLSLIIILSAHEMGHFLAARYYGIKATWPYFIP
IPFAPIGTMGAVIRILEPIRNKKQLFDIGIWGPLMSLILSVPCYIVGIYLSSLGPIDSVRENPGIISFGESIFTITMNQW
ILGPFDPAAQDVWIHPLAQAGWVGLLVTAINLLPFGQLDGGHVIYSVFGERYRNWIYYLFTAFLLLCLWNFSWLLWGFLI
YFIIKVEHPFVPDPAAPLDRIRKIGGLLVLFALIFIFVPSPIQLGTNMNRPGLAEEVWISLKSVYSSL
>Mature_308_residues
MKQSRFSTHIILFILTFLTLTFQSEFFELPFLSIQSLKELFFLRLPYSLSLIIILSAHEMGHFLAARYYGIKATWPYFIP
IPFAPIGTMGAVIRILEPIRNKKQLFDIGIWGPLMSLILSVPCYIVGIYLSSLGPIDSVRENPGIISFGESIFTITMNQW
ILGPFDPAAQDVWIHPLAQAGWVGLLVTAINLLPFGQLDGGHVIYSVFGERYRNWIYYLFTAFLLLCLWNFSWLLWGFLI
YFIIKVEHPFVPDPAAPLDRIRKIGGLLVLFALIFIFVPSPIQLGTNMNRPGLAEEVWISLKSVYSSL

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35100; Mature: 35100

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSRFSTHIILFILTFLTLTFQSEFFELPFLSIQSLKELFFLRLPYSLSLIIILSAHEM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECHHH
GHFLAARYYGIKATWPYFIPIPFAPIGTMGAVIRILEPIRNKKQLFDIGIWGPLMSLILS
HHHHHHHHHCCEECCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHH
VPCYIVGIYLSSLGPIDSVRENPGIISFGESIFTITMNQWILGPFDPAAQDVWIHPLAQA
HHHHHHHHHHHHCCCHHHHHCCCCEEEECCEEEEEEECCEECCCCCCCCCHHEECHHHHH
GWVGLLVTAINLLPFGQLDGGHVIYSVFGERYRNWIYYLFTAFLLLCLWNFSWLLWGFLI
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFIIKVEHPFVPDPAAPLDRIRKIGGLLVLFALIFIFVPSPIQLGTNMNRPGLAEEVWIS
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHH
LKSVYSSL
HHHHHHCC
>Mature Secondary Structure
MKQSRFSTHIILFILTFLTLTFQSEFFELPFLSIQSLKELFFLRLPYSLSLIIILSAHEM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECHHH
GHFLAARYYGIKATWPYFIPIPFAPIGTMGAVIRILEPIRNKKQLFDIGIWGPLMSLILS
HHHHHHHHHCCEECCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHH
VPCYIVGIYLSSLGPIDSVRENPGIISFGESIFTITMNQWILGPFDPAAQDVWIHPLAQA
HHHHHHHHHHHHCCCHHHHHCCCCEEEECCEEEEEEECCEECCCCCCCCCHHEECHHHHH
GWVGLLVTAINLLPFGQLDGGHVIYSVFGERYRNWIYYLFTAFLLLCLWNFSWLLWGFLI
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFIIKVEHPFVPDPAAPLDRIRKIGGLLVLFALIFIFVPSPIQLGTNMNRPGLAEEVWIS
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHH
LKSVYSSL
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA