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The map label for this gene is yfbG [C]

Identifier: 116329518

GI number: 116329518

Start: 3563544

End: 3564482

Strand: Direct

Name: yfbG [C]

Synonym: LBL_2993

Alternate gene names: 116329518

Gene position: 3563544-3564482 (Clockwise)

Preceding gene: 116329517

Following gene: 116329519

Centisome position: 98.59

GC content: 41.43

Gene sequence:

>939_bases
ATGAATCAACGAAGAATATTAATCACCGGCGGTGCTGGATTTATCGGATCTCATCTATGCGAAAGACTTTTGAAAGAGGG
TAACGAAGTCATCTGTTTGGATAATTTGCATACCGGAAGAAAGAAGAACATTCAAAAACTTTTCAGCGATCCCAAGTTCG
AATTTATCAGACACGATATAACGGATCCGATCAAACTTGAAGTTGATCAGATTTACAATATGGCTTGTCCTGCAAGCCCG
ATTCACTATCAATCCAACGCGATTAAGACGATCAAAACGAACGTCTTAGGGATGATGAATACTCTCGGTCTTGCAAAAAG
AGTGAAGGCCAGAATTCTTCAAGCGTCTACTAGCGAAGTATATGGGAATCCATTGGAACATCCGCAAAAAGAAACATATT
GGGGAAACGTAAATCCGATCGGAATTAGAAGCTGCTATGACGAAGGGAAACGAGTTGCGGAAACTCTTTGTTTTGATTAT
CAGAGAAATCATAAAGTGGATGTTCGTGTGATTCGAATTTTCAATACATACGGACCTAAAATGCTTCCGAACGATGGAAG
GGTGGTTAGCAATTTTATCGTACAAGCACTCAAAAAAGAAGACATAACATTGTATGGAGAAGGCGAGCAAACCCGTTCTT
TCTGTTATGTGGATGATTTGGTTGATGGGATCATTCGTATGATGAACACCGAAGGTTTTAATGGTCCGGTGAATCTTGGA
AACGATGGAGAGTTTACCGTTCGTGAATTAGCCGAGTTGGTTTTGAAGGAAACGGGCTCTGTATCCAAAATTGTTCACAA
GCCGTTGCCTCAGGACGATCCGGCGCGTAGAAAACCCGATTTAACTCTTGCAAAACAACAGCTAGGGTTCGAGCCGAAGG
TTCCCCTTGTGGAAGGAATTCGGAAAACCGTCGAATACTTCAAAAATAACTTGGATTAA

Upstream 100 bases:

>100_bases
CAGGAGAAGTAACTCCCGAAGTTATGGAATGGTTTTTCAGTAAGGGACTTGATTTAAACGGAAAACCCTTACCGACGGAG
TTTTTAGAAAAAGAAGAATT

Downstream 100 bases:

>100_bases
ATTTATACAGAGAAATTCTGGACGTACTTTATTAAGCGAGTCCGGAACAACGAGCTATTGATCACCGGGAATGAATTATG
AATATTGGAATTCTAAAAGA

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNQRRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNIQKLFSDPKFEFIRHDITDPIKLEVDQIYNMACPASP
IHYQSNAIKTIKTNVLGMMNTLGLAKRVKARILQASTSEVYGNPLEHPQKETYWGNVNPIGIRSCYDEGKRVAETLCFDY
QRNHKVDVRVIRIFNTYGPKMLPNDGRVVSNFIVQALKKEDITLYGEGEQTRSFCYVDDLVDGIIRMMNTEGFNGPVNLG
NDGEFTVRELAELVLKETGSVSKIVHKPLPQDDPARRKPDLTLAKQQLGFEPKVPLVEGIRKTVEYFKNNLD

Sequences:

>Translated_312_residues
MNQRRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNIQKLFSDPKFEFIRHDITDPIKLEVDQIYNMACPASP
IHYQSNAIKTIKTNVLGMMNTLGLAKRVKARILQASTSEVYGNPLEHPQKETYWGNVNPIGIRSCYDEGKRVAETLCFDY
QRNHKVDVRVIRIFNTYGPKMLPNDGRVVSNFIVQALKKEDITLYGEGEQTRSFCYVDDLVDGIIRMMNTEGFNGPVNLG
NDGEFTVRELAELVLKETGSVSKIVHKPLPQDDPARRKPDLTLAKQQLGFEPKVPLVEGIRKTVEYFKNNLD
>Mature_312_residues
MNQRRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNIQKLFSDPKFEFIRHDITDPIKLEVDQIYNMACPASP
IHYQSNAIKTIKTNVLGMMNTLGLAKRVKARILQASTSEVYGNPLEHPQKETYWGNVNPIGIRSCYDEGKRVAETLCFDY
QRNHKVDVRVIRIFNTYGPKMLPNDGRVVSNFIVQALKKEDITLYGEGEQTRSFCYVDDLVDGIIRMMNTEGFNGPVNLG
NDGEFTVRELAELVLKETGSVSKIVHKPLPQDDPARRKPDLTLAKQQLGFEPKVPLVEGIRKTVEYFKNNLD

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=311, Percent_Identity=56.9131832797428, Blast_Score=377, Evalue=1e-105,
Organism=Homo sapiens, GI7657641, Length=325, Percent_Identity=29.8461538461538, Blast_Score=120, Evalue=2e-27,
Organism=Escherichia coli, GI1788589, Length=344, Percent_Identity=26.1627906976744, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI48994969, Length=340, Percent_Identity=25, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788353, Length=340, Percent_Identity=25.5882352941176, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1788365, Length=335, Percent_Identity=23.5820895522388, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1786974, Length=307, Percent_Identity=23.7785016286645, Blast_Score=72, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17539532, Length=311, Percent_Identity=55.9485530546624, Blast_Score=369, Evalue=1e-102,
Organism=Caenorhabditis elegans, GI17568069, Length=331, Percent_Identity=27.4924471299094, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI115532424, Length=324, Percent_Identity=25.3086419753086, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI21356223, Length=310, Percent_Identity=59.3548387096774, Blast_Score=390, Evalue=1e-109,
Organism=Drosophila melanogaster, GI19923002, Length=349, Percent_Identity=25.7879656160458, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35364; Mature: 35364

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNIQKLFSDPKFEFIRHDI
CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHCC
TDPIKLEVDQIYNMACPASPIHYQSNAIKTIKTNVLGMMNTLGLAKRVKARILQASTSEV
CCCCEEEHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGNPLEHPQKETYWGNVNPIGIRSCYDEGKRVAETLCFDYQRNHKVDVRVIRIFNTYGPK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCC
MLPNDGRVVSNFIVQALKKEDITLYGEGEQTRSFCYVDDLVDGIIRMMNTEGFNGPVNLG
CCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCC
NDGEFTVRELAELVLKETGSVSKIVHKPLPQDDPARRKPDLTLAKQQLGFEPKVPLVEGI
CCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHH
RKTVEYFKNNLD
HHHHHHHHHCCC
>Mature Secondary Structure
MNQRRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNIQKLFSDPKFEFIRHDI
CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHCC
TDPIKLEVDQIYNMACPASPIHYQSNAIKTIKTNVLGMMNTLGLAKRVKARILQASTSEV
CCCCEEEHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGNPLEHPQKETYWGNVNPIGIRSCYDEGKRVAETLCFDYQRNHKVDVRVIRIFNTYGPK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCC
MLPNDGRVVSNFIVQALKKEDITLYGEGEQTRSFCYVDDLVDGIIRMMNTEGFNGPVNLG
CCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCC
NDGEFTVRELAELVLKETGSVSKIVHKPLPQDDPARRKPDLTLAKQQLGFEPKVPLVEGI
CCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHH
RKTVEYFKNNLD
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]