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The map label for this gene is yhdE [C]

Identifier: 116329502

GI number: 116329502

Start: 3542144

End: 3542701

Strand: Direct

Name: yhdE [C]

Synonym: LBL_2976

Alternate gene names: 116329502

Gene position: 3542144-3542701 (Clockwise)

Preceding gene: 116329498

Following gene: 116329503

Centisome position: 98.0

GC content: 38.53

Gene sequence:

>558_bases
ATGATCGTTCTCAGATCCAGATCTCCCCGTAGAAAGTACGTCCTGGAATCCTTAGACCTTGATTTCAGAATCGAACCGGA
AGACATAGACGAAAGTTCCTTAAAAAACGAACATCCTTTGGAATATTTGAAAAGGATATGTTTATCCAAGTTAGGCACAA
GATCTAAAGACGAATTTTTGATCTCCTGCGACACAATTGTCGTTCAAGAGAATTCTATCCTTCAAAAGCCCAAAAACTTT
CTGGAAGCAGTGGAAATGCTCGAAAGGTTGTCCGGAAAAACTCATAAGGTCGCTTCGGGACTAGGAATTTATTATAAAGG
ACTCGAACGATTTGCATTCGAGTTCTCTCAAGTTCATTTTCGTTCTTGGAATCATAAACAAATTCGAGAATACGTCGAAA
AATATTCTCCCTTTGATAAGGCGGGAAGTTACGGGGTTCAGGATAAGGAAGGTCCGGTTCGGTCTTTCGATGGATCATAC
ACAAATATACTTGGATTTCCGATACGAACGTTTTTTCAATACCACGAATTTTGGAAAAAATATTTAAAAGGAAACTAA

Upstream 100 bases:

>100_bases
CGACTTTATTCGACGGAGTTCGTTGTTGATTCTCTTTCATCCGTATCAATATCGGCAGGAAAACGGATGCAAGGCAACGC
TTTTCCCGAATCGTGGATTT

Downstream 100 bases:

>100_bases
GACAAAATGGCGCCCCTTCTGGGCTTGAAAAACGTGGGTTAGATGCGAGCATTTACCACAAAACAAAAAAACCAACAGAA
GGAACGCAATGAAAAGAAAA

Product: nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MIVLRSRSPRRKYVLESLDLDFRIEPEDIDESSLKNEHPLEYLKRICLSKLGTRSKDEFLISCDTIVVQENSILQKPKNF
LEAVEMLERLSGKTHKVASGLGIYYKGLERFAFEFSQVHFRSWNHKQIREYVEKYSPFDKAGSYGVQDKEGPVRSFDGSY
TNILGFPIRTFFQYHEFWKKYLKGN

Sequences:

>Translated_185_residues
MIVLRSRSPRRKYVLESLDLDFRIEPEDIDESSLKNEHPLEYLKRICLSKLGTRSKDEFLISCDTIVVQENSILQKPKNF
LEAVEMLERLSGKTHKVASGLGIYYKGLERFAFEFSQVHFRSWNHKQIREYVEKYSPFDKAGSYGVQDKEGPVRSFDGSY
TNILGFPIRTFFQYHEFWKKYLKGN
>Mature_185_residues
MIVLRSRSPRRKYVLESLDLDFRIEPEDIDESSLKNEHPLEYLKRICLSKLGTRSKDEFLISCDTIVVQENSILQKPKNF
LEAVEMLERLSGKTHKVASGLGIYYKGLERFAFEFSQVHFRSWNHKQIREYVEKYSPFDKAGSYGVQDKEGPVRSFDGSY
TNILGFPIRTFFQYHEFWKKYLKGN

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Homo sapiens, GI117553627, Length=193, Percent_Identity=33.6787564766839, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI291045183, Length=183, Percent_Identity=31.1475409836066, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI310133124, Length=123, Percent_Identity=36.5853658536585, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI291045181, Length=123, Percent_Identity=36.5853658536585, Blast_Score=72, Evalue=3e-13,
Organism=Escherichia coli, GI1789646, Length=170, Percent_Identity=32.3529411764706, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI87081830, Length=148, Percent_Identity=29.7297297297297, Blast_Score=65, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193202443, Length=185, Percent_Identity=31.3513513513514, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI78706856, Length=181, Percent_Identity=32.0441988950276, Blast_Score=86, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2976_LEPBL (Q04XA6)

Other databases:

- EMBL:   CP000348
- RefSeq:   YP_799222.1
- ProteinModelPortal:   Q04XA6
- SMR:   Q04XA6
- STRING:   Q04XA6
- GeneID:   4406034
- GenomeReviews:   CP000348_GR
- KEGG:   lbl:LBL_2976
- eggNOG:   COG0424
- HOGENOM:   HBG414045
- OMA:   RNHRVYT
- ProtClustDB:   CLSK573293
- BioCyc:   LBOR355276:LBL_2976-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305
- TIGRFAMs:   TIGR00172

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 21834; Mature: 21834

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: ACT_SITE 31-31

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLRSRSPRRKYVLESLDLDFRIEPEDIDESSLKNEHPLEYLKRICLSKLGTRSKDEFL
CEEECCCCCHHHHHHHHCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCEE
ISCDTIVVQENSILQKPKNFLEAVEMLERLSGKTHKVASGLGIYYKGLERFAFEFSQVHF
EECCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSWNHKQIREYVEKYSPFDKAGSYGVQDKEGPVRSFDGSYTNILGFPIRTFFQYHEFWKK
CCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YLKGN
HHCCC
>Mature Secondary Structure
MIVLRSRSPRRKYVLESLDLDFRIEPEDIDESSLKNEHPLEYLKRICLSKLGTRSKDEFL
CEEECCCCCHHHHHHHHCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCEE
ISCDTIVVQENSILQKPKNFLEAVEMLERLSGKTHKVASGLGIYYKGLERFAFEFSQVHF
EECCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSWNHKQIREYVEKYSPFDKAGSYGVQDKEGPVRSFDGSYTNILGFPIRTFFQYHEFWKK
CCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YLKGN
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA