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The map label for this gene is splB

Identifier: 116329452

GI number: 116329452

Start: 3472764

End: 3473801

Strand: Direct

Name: splB

Synonym: LBL_2921

Alternate gene names: NA

Gene position: 3472764-3473801 (Clockwise)

Preceding gene: 116329451

Following gene: 116329453

Centisome position: 96.08

GC content: 39.4

Gene sequence:

>1038_bases
ATGCACTCAAACAATTTTATCAGTCCTAAAAGATTCTCTCATATCTACGTGGAAGAATCCGCGAAGTACCATCCTAAAAC
TTCTGAAATTCTTTCCAAGTTTCCCGAATCGTACACGATCGCAATCGATTCTTACAAGGAAGTATTCAATCCTTCCGCTC
AAAGTTTCCAAACTCAGAAACGAAGCCCGAAACTTATATTAGCAAAACGAAAAGAACAATTCTTATATCCGGGCTCGGGA
ATTGCTCCGGACTTCGGATATCAATTCTTCTATTATAACGCCCTTGTACTAAACTGCCTCTACAATTGTTCCTATTGTTA
TCTTCAAGGAATGTATCCTTCGGCTAATATCGTGGTTTTTGTAAACAATGAAGAATATATCCAAAAAACCCAGGAACAAC
TTAAACTTTCCAAATCCCTTTATCTTTGTATTTCTTACGATACGGATCTTTTGGCCCTGGAAAATATATTAGGGTATTGT
AAAGAATGGATTTTGTTCGCGGGTTCCAATCCCGACTTGATCGTCGAAATCAGAACCAAAAGCGCCAATTTCAAATCCAT
CGCCGATCTTAAGCCGACTTCGAATACCATTCTTGCTTGGACTCTTTCGCCGGATTCCGTGATCGGGGAACATGAACCTC
TGACTCCGAAGCTTTCCTCCCGATTGAAAAATATTAAAGGCGCTTTAAATGCGGGTTGGCAGGTCCGACTTTGTTTCGAT
CCAATCTTAAACGTCCCGAATTGGAAATCCGTTTATTCAGAATTCGTTCGGAAAATTTTCGAAGAAATTCCGGGAGAAAA
ACTGAGAGATATCAGTCTGGGTATATTTCGGATGAATTCGGACTATTTTAAGAATTCCAAAAAGCGTAGACCGGATTCTT
ATTTGTTTTACCTTCCGATGAATACTCGCGGAGGAATAAAATCGTATTCGGAAGTATTAGAAAAAGAAATGTTTACAGTC
CTTGAAAAAGAATTGGAAACATTTGTCCCTCGAGAAAAAATCCACAGACTCGTCGCCGACCAAACGGAATACAAATGA

Upstream 100 bases:

>100_bases
TCCTCCGAACAAGGTCTTAACATTTTGAAAAACGCAAACGGAACTCTAAACTTGAAAGAAGCCGGAGTTAAAACAAGAGA
AGAAGGAAGGAAAGGGCTAT

Downstream 100 bases:

>100_bases
AAACGAATTCGGAACCAAACAACTTGTTGGCGATCGTCACAGGTTCTTCCAAAGGAATCGGAAAAGCGATTTCAGAATTT
TTAATTTCCGAAGGTTACAG

Product: DNA repair photolyase

Products: NA

Alternate protein names: Radical SAM Domain Protein; DNA Repair Photolyase; Spore Photoproduct Lyase; LOW QUALITY PROTEIN Spore Photoproduct Lyase; DNA Repair PhotolyaB-Like Protein; Radical SAM Domain-Containing Protein; Spore Photoproduct; Spore Photoproduct Lya Related Protein; Radical Sam Domain Protein; Photoproduct Lyase; DNA Repair Photolyase-Like Protein Protein; LOW QUALITY PROTEIN DNA Repair Photolyase-Like Protein; Photolyase-Like Protein; DNA Repair Photolyase-Like

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MHSNNFISPKRFSHIYVEESAKYHPKTSEILSKFPESYTIAIDSYKEVFNPSAQSFQTQKRSPKLILAKRKEQFLYPGSG
IAPDFGYQFFYYNALVLNCLYNCSYCYLQGMYPSANIVVFVNNEEYIQKTQEQLKLSKSLYLCISYDTDLLALENILGYC
KEWILFAGSNPDLIVEIRTKSANFKSIADLKPTSNTILAWTLSPDSVIGEHEPLTPKLSSRLKNIKGALNAGWQVRLCFD
PILNVPNWKSVYSEFVRKIFEEIPGEKLRDISLGIFRMNSDYFKNSKKRRPDSYLFYLPMNTRGGIKSYSEVLEKEMFTV
LEKELETFVPREKIHRLVADQTEYK

Sequences:

>Translated_345_residues
MHSNNFISPKRFSHIYVEESAKYHPKTSEILSKFPESYTIAIDSYKEVFNPSAQSFQTQKRSPKLILAKRKEQFLYPGSG
IAPDFGYQFFYYNALVLNCLYNCSYCYLQGMYPSANIVVFVNNEEYIQKTQEQLKLSKSLYLCISYDTDLLALENILGYC
KEWILFAGSNPDLIVEIRTKSANFKSIADLKPTSNTILAWTLSPDSVIGEHEPLTPKLSSRLKNIKGALNAGWQVRLCFD
PILNVPNWKSVYSEFVRKIFEEIPGEKLRDISLGIFRMNSDYFKNSKKRRPDSYLFYLPMNTRGGIKSYSEVLEKEMFTV
LEKELETFVPREKIHRLVADQTEYK
>Mature_345_residues
MHSNNFISPKRFSHIYVEESAKYHPKTSEILSKFPESYTIAIDSYKEVFNPSAQSFQTQKRSPKLILAKRKEQFLYPGSG
IAPDFGYQFFYYNALVLNCLYNCSYCYLQGMYPSANIVVFVNNEEYIQKTQEQLKLSKSLYLCISYDTDLLALENILGYC
KEWILFAGSNPDLIVEIRTKSANFKSIADLKPTSNTILAWTLSPDSVIGEHEPLTPKLSSRLKNIKGALNAGWQVRLCFD
PILNVPNWKSVYSEFVRKIFEEIPGEKLRDISLGIFRMNSDYFKNSKKRRPDSYLFYLPMNTRGGIKSYSEVLEKEMFTV
LEKELETFVPREKIHRLVADQTEYK

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.1.99.-

Molecular weight: Translated: 40036; Mature: 40036

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSNNFISPKRFSHIYVEESAKYHPKTSEILSKFPESYTIAIDSYKEVFNPSAQSFQTQK
CCCCCCCCCHHCEEEEEECCCCCCCCHHHHHHHCCCCEEEEEECHHHHHCCCHHHHHHHC
RSPKLILAKRKEQFLYPGSGIAPDFGYQFFYYNALVLNCLYNCSYCYLQGMYPSANIVVF
CCCCEEEEECCHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEE
VNNEEYIQKTQEQLKLSKSLYLCISYDTDLLALENILGYCKEWILFAGSNPDLIVEIRTK
ECCHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHEEEECCCCCEEEEEECC
SANFKSIADLKPTSNTILAWTLSPDSVIGEHEPLTPKLSSRLKNIKGALNAGWQVRLCFD
CCCCCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEH
PILNVPNWKSVYSEFVRKIFEEIPGEKLRDISLGIFRMNSDYFKNSKKRRPDSYLFYLPM
HHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCEEEEEEECCHHHHCCCCCCCCCEEEEEEC
NTRGGIKSYSEVLEKEMFTVLEKELETFVPREKIHRLVADQTEYK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHSNNFISPKRFSHIYVEESAKYHPKTSEILSKFPESYTIAIDSYKEVFNPSAQSFQTQK
CCCCCCCCCHHCEEEEEECCCCCCCCHHHHHHHCCCCEEEEEECHHHHHCCCHHHHHHHC
RSPKLILAKRKEQFLYPGSGIAPDFGYQFFYYNALVLNCLYNCSYCYLQGMYPSANIVVF
CCCCEEEEECCHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEE
VNNEEYIQKTQEQLKLSKSLYLCISYDTDLLALENILGYCKEWILFAGSNPDLIVEIRTK
ECCHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHEEEECCCCCEEEEEECC
SANFKSIADLKPTSNTILAWTLSPDSVIGEHEPLTPKLSSRLKNIKGALNAGWQVRLCFD
CCCCCHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEH
PILNVPNWKSVYSEFVRKIFEEIPGEKLRDISLGIFRMNSDYFKNSKKRRPDSYLFYLPM
HHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCEEEEEEECCHHHHCCCCCCCCCEEEEEEC
NTRGGIKSYSEVLEKEMFTVLEKELETFVPREKIHRLVADQTEYK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA