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The map label for this gene is 116329377

Identifier: 116329377

GI number: 116329377

Start: 3379028

End: 3379786

Strand: Direct

Name: 116329377

Synonym: LBL_2833

Alternate gene names: NA

Gene position: 3379028-3379786 (Clockwise)

Preceding gene: 116329375

Following gene: 116329383

Centisome position: 93.49

GC content: 37.94

Gene sequence:

>759_bases
TTGAATATTTTCTTTGTCGCGATTGAATTATTTTTTTCGATCGTAAACTGCAACAAAAAAGAACCAATCCCCATATTGGA
AATTCGGGATCTTACCGAAAAAGAAAATCTCGTGGAAGCTCTTCAAAAAGCGGAAGAAAATCTGAAACTCAAAGGTGATA
CCGCCGAGTTACTTTACATCCGCGGCTGGATTCGTTATCTTCAAAAGAATCAAATCGCGGCGATGAACGATTTCAAAAAA
TGTATTGCTCTCGATCCTAAATCCCTAGATTGTAAAAGAGGGCTCGGTCTTATATACGAATCCAACAAAGAATATAAAGA
AGCAGCAACCACTTATCAAGAGGCCCTCATACTCGCAAAGAGAAAAGGACCGGACTTTGAGGCGCTTATTCATGAGAATA
TCGGAAGCCTTTACCTCAGGCAGAATTTGAGAAAAGAAAGTTTAAGCGAATTTCAAAACGCGATTTCCCTTTCCGATAAA
GGAGATGCTTACTACGGTTTTAGTTTGTGTTTGATCATGGAAGGAAACTGGGAAGAAGCAATTTCTTATTTGGAAAAAGG
GGTTTCCAAATCGTTTCGCACCAAGGCGTTTCAATCCGAATCTCATTTCCTATTATCGAAGTTCTACTTCGAAAAGAAAA
AAGATCCTGTAAAAGCGGAAATAGAAATCAAAAAAGCGATCGAGATTTTCCCTCTTCATAAGGAATACTTGGATGCATTA
CAAACTTATATAGGGGAAAGAATTAAATCCGATCTTTGA

Upstream 100 bases:

>100_bases
AAAATAGATCATCAATCTCCGCAAAATTTTAAATGTACAATTAAAAAGATAGGATTTGAAATAAAACATGAACAGATTCA
ATCTCCGCTTAAGGATTTTT

Downstream 100 bases:

>100_bases
TTTCAAATATGATAAAAGTAGTATATAGATCTATTTATAAACAAATCATAGTTCCGTTTTTTATATGCCGATCCCGACTG
CCATGATCTGGATCACAAAC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MNIFFVAIELFFSIVNCNKKEPIPILEIRDLTEKENLVEALQKAEENLKLKGDTAELLYIRGWIRYLQKNQIAAMNDFKK
CIALDPKSLDCKRGLGLIYESNKEYKEAATTYQEALILAKRKGPDFEALIHENIGSLYLRQNLRKESLSEFQNAISLSDK
GDAYYGFSLCLIMEGNWEEAISYLEKGVSKSFRTKAFQSESHFLLSKFYFEKKKDPVKAEIEIKKAIEIFPLHKEYLDAL
QTYIGERIKSDL

Sequences:

>Translated_252_residues
MNIFFVAIELFFSIVNCNKKEPIPILEIRDLTEKENLVEALQKAEENLKLKGDTAELLYIRGWIRYLQKNQIAAMNDFKK
CIALDPKSLDCKRGLGLIYESNKEYKEAATTYQEALILAKRKGPDFEALIHENIGSLYLRQNLRKESLSEFQNAISLSDK
GDAYYGFSLCLIMEGNWEEAISYLEKGVSKSFRTKAFQSESHFLLSKFYFEKKKDPVKAEIEIKKAIEIFPLHKEYLDAL
QTYIGERIKSDL
>Mature_252_residues
MNIFFVAIELFFSIVNCNKKEPIPILEIRDLTEKENLVEALQKAEENLKLKGDTAELLYIRGWIRYLQKNQIAAMNDFKK
CIALDPKSLDCKRGLGLIYESNKEYKEAATTYQEALILAKRKGPDFEALIHENIGSLYLRQNLRKESLSEFQNAISLSDK
GDAYYGFSLCLIMEGNWEEAISYLEKGVSKSFRTKAFQSESHFLLSKFYFEKKKDPVKAEIEIKKAIEIFPLHKEYLDAL
QTYIGERIKSDL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29192; Mature: 29192

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFFVAIELFFSIVNCNKKEPIPILEIRDLTEKENLVEALQKAEENLKLKGDTAELLYI
CCEEHHHHHHHHHHHCCCCCCCCCEEHHHCCHHHHHHHHHHHHHHHCCEECCCHHHHHHH
RGWIRYLQKNQIAAMNDFKKCIALDPKSLDCKRGLGLIYESNKEYKEAATTYQEALILAK
HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHCCCCEEEECCCHHHHHHHHHHHHHHHHH
RKGPDFEALIHENIGSLYLRQNLRKESLSEFQNAISLSDKGDAYYGFSLCLIMEGNWEEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCHHHH
ISYLEKGVSKSFRTKAFQSESHFLLSKFYFEKKKDPVKAEIEIKKAIEIFPLHKEYLDAL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHEEHHHHHHHCCCCHHHHHHH
QTYIGERIKSDL
HHHHHHHHHCCC
>Mature Secondary Structure
MNIFFVAIELFFSIVNCNKKEPIPILEIRDLTEKENLVEALQKAEENLKLKGDTAELLYI
CCEEHHHHHHHHHHHCCCCCCCCCEEHHHCCHHHHHHHHHHHHHHHCCEECCCHHHHHHH
RGWIRYLQKNQIAAMNDFKKCIALDPKSLDCKRGLGLIYESNKEYKEAATTYQEALILAK
HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHCCCCEEEECCCHHHHHHHHHHHHHHHHH
RKGPDFEALIHENIGSLYLRQNLRKESLSEFQNAISLSDKGDAYYGFSLCLIMEGNWEEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCHHHH
ISYLEKGVSKSFRTKAFQSESHFLLSKFYFEKKKDPVKAEIEIKKAIEIFPLHKEYLDAL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHEEHHHHHHHCCCCHHHHHHH
QTYIGERIKSDL
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA