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The map label for this gene is yqgE [C]

Identifier: 116329208

GI number: 116329208

Start: 3132865

End: 3133413

Strand: Reverse

Name: yqgE [C]

Synonym: LBL_2641

Alternate gene names: 116329208

Gene position: 3133413-3132865 (Counterclockwise)

Preceding gene: 116329209

Following gene: 116329207

Centisome position: 86.69

GC content: 40.98

Gene sequence:

>549_bases
ATGGAAGAAACTTATAACGGAAAAATTCTAATCTCCAACTCTTCGATCGTTATGGACTATTTCAACCAAACGGTTATCTT
AATGGTGGAGCATGACAATCAAGGCGCTTTCGGGTTGGTACTGAATAAAAAACAGAAGGCGTTCATCGGAGACGTAATCC
AAGGAATTCCGGATCACGTTAGTCATACTCTTCCGATTTATTCCGGCGGTCCTGTGGATCCTACTTTTATATCAGTGTTG
CACGAAGACAAGAAAATTTCTCAGCCCGGAATTGAAGTGATTCCTGGTTTATATCTTGCGAGAAGTTACGATACTCTCCT
GGAATTATTGAAATCCACTTCTAAGTTTCACGTATACCAAGGATATTCCGGTTGGAGCGCCGGACAGTTGGAAACTGAGA
TGAATCGTAAGTCTTGGGTAGTGCATGAAGCCACAAAAGATTTTGTCTTAAATCAAGATCCTGAAACAACATGGCAGGAA
GCTCTCAAAAGCAAGGGCGGGATTTATAAGTATTTTGTCGAACACACAAAAGATCCTATGTTGAACTGA

Upstream 100 bases:

>100_bases
ATAGAAATTCCGACGTTTCCACTTTGGAAATCACTTATCAAATTCTTTCTGAAATCCACGGAACTTCTAAAAAGTAATCC
GGTCTAAAACTGGTTAAAAT

Downstream 100 bases:

>100_bases
AACCGTTTTTTTAATCTTTACAGAGAAATTTGGATTATTATGATCAAAAAACAAAGAGGTTAAGGTATGAAAAAGTTGCA
AAGTTTGTTTTTTATTTTTA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MEETYNGKILISNSSIVMDYFNQTVILMVEHDNQGAFGLVLNKKQKAFIGDVIQGIPDHVSHTLPIYSGGPVDPTFISVL
HEDKKISQPGIEVIPGLYLARSYDTLLELLKSTSKFHVYQGYSGWSAGQLETEMNRKSWVVHEATKDFVLNQDPETTWQE
ALKSKGGIYKYFVEHTKDPMLN

Sequences:

>Translated_182_residues
MEETYNGKILISNSSIVMDYFNQTVILMVEHDNQGAFGLVLNKKQKAFIGDVIQGIPDHVSHTLPIYSGGPVDPTFISVL
HEDKKISQPGIEVIPGLYLARSYDTLLELLKSTSKFHVYQGYSGWSAGQLETEMNRKSWVVHEATKDFVLNQDPETTWQE
ALKSKGGIYKYFVEHTKDPMLN
>Mature_182_residues
MEETYNGKILISNSSIVMDYFNQTVILMVEHDNQGAFGLVLNKKQKAFIGDVIQGIPDHVSHTLPIYSGGPVDPTFISVL
HEDKKISQPGIEVIPGLYLARSYDTLLELLKSTSKFHVYQGYSGWSAGQLETEMNRKSWVVHEATKDFVLNQDPETTWQE
ALKSKGGIYKYFVEHTKDPMLN

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003774 [H]

Pfam domain/function: PF02622 DUF179 [H]

EC number: NA

Molecular weight: Translated: 20568; Mature: 20568

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEETYNGKILISNSSIVMDYFNQTVILMVEHDNQGAFGLVLNKKQKAFIGDVIQGIPDHV
CCCCCCCEEEEECCEEEEEECCCEEEEEEEECCCCEEEEEECCCHHHHHHHHHHCCHHHH
SHTLPIYSGGPVDPTFISVLHEDKKISQPGIEVIPGLYLARSYDTLLELLKSTSKFHVYQ
HCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCEEEEE
GYSGWSAGQLETEMNRKSWVVHEATKDFVLNQDPETTWQEALKSKGGIYKYFVEHTKDPM
CCCCCCCCCHHHHCCCHHEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEHHHCCCCCC
LN
CC
>Mature Secondary Structure
MEETYNGKILISNSSIVMDYFNQTVILMVEHDNQGAFGLVLNKKQKAFIGDVIQGIPDHV
CCCCCCCEEEEECCEEEEEECCCEEEEEEEECCCCEEEEEECCCHHHHHHHHHHCCHHHH
SHTLPIYSGGPVDPTFISVLHEDKKISQPGIEVIPGLYLARSYDTLLELLKSTSKFHVYQ
HCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCEEEEE
GYSGWSAGQLETEMNRKSWVVHEATKDFVLNQDPETTWQEALKSKGGIYKYFVEHTKDPM
CCCCCCCCCHHHHCCCHHEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEHHHCCCCCC
LN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]