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The map label for this gene is yijE [C]

Identifier: 116329204

GI number: 116329204

Start: 3123299

End: 3124207

Strand: Direct

Name: yijE [C]

Synonym: LBL_2634

Alternate gene names: 116329204

Gene position: 3123299-3124207 (Clockwise)

Preceding gene: 116329203

Following gene: 116329205

Centisome position: 86.41

GC content: 40.48

Gene sequence:

>909_bases
ATGTTATCGGATACTAGTGCAAAATTTTACGTCCTCCTTGTAATTGCCATGATTTCCTGGGGTTTTGCCTGGCCTTCCGC
AAAGCTCATCGTGGGAACTCAACATCCGAACGTGATCATCTTCTGGAGATTTTTAGCGACCGCACTCTCCCTTCTCCCAG
TCGTTTTCTGGAGAAAAGGATTTTTCCGTTTACCGAATTATAAAGTTTTATTTCAGATCACAATTGGTGGAATTCTTTAT
ACCATCTACAATCAGTTCTTTCTTCTAGGTTTGAAAAATGGACTTGCAGGAGCAGGCGGAGTTCTCGTAACCACAATGAA
CCCGATTTTTACGTACGTGTTCGTACATTCCTTCCAAAGGAAGTTGCCTTCCGCTCGGGAAGGAATCGGACTTTTATTAG
GTCTAGTCGGAGGTTGTATTCTACTTAGGCTTTGGGAATTCGATTTGAATTCTTTATTCCGATCCGGAAATATTTTTTTT
CTTCTTTGTGCGGTTAGTTGGACCCTCTTAAGCATGAATAGTCACAGTACGGGACAGACAATTTCCCCGCTTGTGTATAG
CTTTTATGTTTTTGCAATCGGAACAATCCTAGATTTATTTCTCGCGTTTCCTTACGGAGTGGAAAATGCTTTGAGTTCCG
GGCCTTATTTTTGGTTTCATATTTTTTATCTCTCCGTGATCGCTACAACTTTCGGAACCACGGTTTACTTTTTTGCCTCC
ACCAAATTAGGTTCGAGAGTTGCGAGTTCGTTTATCTTTTTAGTTCCAGTCACAGCTCTTTTGGGAAGTTGGATTTTTCT
AGATGAATCTCCGAATCTTACCACTATGATCGGAGGCACTTTTGCCGTACTTGCAGTTTTTCTTTTGAATCGAAATCAAA
ATGATGAAAATAAAAAGAGTGGAATTTGA

Upstream 100 bases:

>100_bases
CTACATTTTGAGATTAGAAATGGGCTCTCTATTACTTTAATCGGAGTAAAGGTTGAATTCGTTTTTCAATTTCTGAAATT
GGTAAAAGAGAGCTATTACT

Downstream 100 bases:

>100_bases
AATTCCGATCAGAAATTAGGATCTTTGTAAAAAACAGTTTTCAAAAATAAACTTTCGGACCTCTTTCCATTCGAGTAAAT
CGTAGTCACAAAGTAAAAAA

Product: drug/metabolite transporter family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MLSDTSAKFYVLLVIAMISWGFAWPSAKLIVGTQHPNVIIFWRFLATALSLLPVVFWRKGFFRLPNYKVLFQITIGGILY
TIYNQFFLLGLKNGLAGAGGVLVTTMNPIFTYVFVHSFQRKLPSAREGIGLLLGLVGGCILLRLWEFDLNSLFRSGNIFF
LLCAVSWTLLSMNSHSTGQTISPLVYSFYVFAIGTILDLFLAFPYGVENALSSGPYFWFHIFYLSVIATTFGTTVYFFAS
TKLGSRVASSFIFLVPVTALLGSWIFLDESPNLTTMIGGTFAVLAVFLLNRNQNDENKKSGI

Sequences:

>Translated_302_residues
MLSDTSAKFYVLLVIAMISWGFAWPSAKLIVGTQHPNVIIFWRFLATALSLLPVVFWRKGFFRLPNYKVLFQITIGGILY
TIYNQFFLLGLKNGLAGAGGVLVTTMNPIFTYVFVHSFQRKLPSAREGIGLLLGLVGGCILLRLWEFDLNSLFRSGNIFF
LLCAVSWTLLSMNSHSTGQTISPLVYSFYVFAIGTILDLFLAFPYGVENALSSGPYFWFHIFYLSVIATTFGTTVYFFAS
TKLGSRVASSFIFLVPVTALLGSWIFLDESPNLTTMIGGTFAVLAVFLLNRNQNDENKKSGI
>Mature_302_residues
MLSDTSAKFYVLLVIAMISWGFAWPSAKLIVGTQHPNVIIFWRFLATALSLLPVVFWRKGFFRLPNYKVLFQITIGGILY
TIYNQFFLLGLKNGLAGAGGVLVTTMNPIFTYVFVHSFQRKLPSAREGIGLLLGLVGGCILLRLWEFDLNSLFRSGNIFF
LLCAVSWTLLSMNSHSTGQTISPLVYSFYVFAIGTILDLFLAFPYGVENALSSGPYFWFHIFYLSVIATTFGTTVYFFAS
TKLGSRVASSFIFLVPVTALLGSWIFLDESPNLTTMIGGTFAVLAVFLLNRNQNDENKKSGI

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33634; Mature: 33634

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDTSAKFYVLLVIAMISWGFAWPSAKLIVGTQHPNVIIFWRFLATALSLLPVVFWRKG
CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHCC
FFRLPNYKVLFQITIGGILYTIYNQFFLLGLKNGLAGAGGVLVTTMNPIFTYVFVHSFQR
CEECCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
KLPSAREGIGLLLGLVGGCILLRLWEFDLNSLFRSGNIFFLLCAVSWTLLSMNSHSTGQT
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCCCH
ISPLVYSFYVFAIGTILDLFLAFPYGVENALSSGPYFWFHIFYLSVIATTFGTTVYFFAS
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEC
TKLGSRVASSFIFLVPVTALLGSWIFLDESPNLTTMIGGTFAVLAVFLLNRNQNDENKKS
CHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCC
GI
CC
>Mature Secondary Structure
MLSDTSAKFYVLLVIAMISWGFAWPSAKLIVGTQHPNVIIFWRFLATALSLLPVVFWRKG
CCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHCC
FFRLPNYKVLFQITIGGILYTIYNQFFLLGLKNGLAGAGGVLVTTMNPIFTYVFVHSFQR
CEECCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
KLPSAREGIGLLLGLVGGCILLRLWEFDLNSLFRSGNIFFLLCAVSWTLLSMNSHSTGQT
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCCCH
ISPLVYSFYVFAIGTILDLFLAFPYGVENALSSGPYFWFHIFYLSVIATTFGTTVYFFAS
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEC
TKLGSRVASSFIFLVPVTALLGSWIFLDESPNLTTMIGGTFAVLAVFLLNRNQNDENKKS
CHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCC
GI
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]