| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116329165
Identifier: 116329165
GI number: 116329165
Start: 3068155
End: 3069384
Strand: Direct
Name: 116329165
Synonym: LBL_2592
Alternate gene names: NA
Gene position: 3068155-3069384 (Clockwise)
Preceding gene: 116329160
Following gene: 116329166
Centisome position: 84.89
GC content: 44.8
Gene sequence:
>1230_bases GTGATCGCCATTCTCAAGAATCGTAGAAGTCCGTTCTACTTAGCGACTACGTTCTTCATTCTTCTTTTTTTCGCATTGTT TGCATCCACACTCGCCTTCCTATTCACCGGAATCCTTATCTTAATTCTTATCATCCATCCTCTTCTTTTAAACTGGATCG GAAAATTATACGGACAAGAGGACATTGCGGACGAAGTTCATTTTGCGAAAACGAAGGACGGATGGAATATCGCTCTCCAC AGACATATTCCTCCTCAACAGAATCCGCAATTGGCACCCGTGTTGGTCGTTCACGGTATCGCAACGAATAAGTTCATGGT CGACTTAGATAGAAGACATTCTCTCCCTTATTATCTTAAACTCAGAGGTTACGACGTATTTGCGGTTTCTCTTCGAGGTT GTGGACGATCTTATCACGAAAGCCCGACTCGTTACGAAGACTTCACGTTCGATGATATCGTAAAATACGACATTCCCGCA ATGTTCGAGAAGGTAAAAAAAATCACCGGCTCCGAACGCGTCTCCTATGTGGGGCATTCTATGGGAGCGATGATTCTATA TTCTCATTTTTGTATGTCCGAGCGTAAAAAGGATACGGAAGACATTGCCGCCTTTGTATCCTTAGGCGGCCCCGGAAATC TAAATCATATCGGCATCACTCTGATCGGACTTCTTTCCCGATTTCCCCGTGCGAGAAAGATGCTGGATCTGAAATTCGGA GCCTCCATCCTCGCTCCTTTAGCGGGAGAACTTTACACTCCGATCGACGAAATTCTTTACAACCCTAAGGTAACTTCGTC TAAAACGGTAAAGAAAATTATGAAGAACGCAATCGAGAATATTGCGGACGGAGTCACCGAACAATTCATGCATTGGATCG AAACAAAACGGATGCATTCTCTCAACGGATTTTACGATTATATCCGACTTCAGAAAAATATTTCCGTCCCCGCTCTGTTT ATCGCAGGCGAAAAAGACGTCATCGCGACTCCGGAAGCAGTCCATTCCGTTTACGAAAATGCAAGTTCTAAAAAAAAGGA ATTCAGGGTCATTTCCAAAGCGAACGGTTCTTCGGACGATTACGGTCACGCTTGTCTCGTGATGGGGGATCGCGCCGAGG ATGACGTCTTTCAATACGTAGAATCCTTCTTGAAAAAACACGGACTCCGTTCTCAACCCGGAATCATGACCAAAATCAAG GAAGGAATTCTCTCCGCGTTTCGGAGATGA
Upstream 100 bases:
>100_bases AGTTTGAGACACGTTGTACTCACCAGATTCTTTTTTTCGATTTTTCGGGCAAGCAGCTTCTATTTCTTGACATTTCGGAT TTTCCATTATTTTTAATTCT
Downstream 100 bases:
>100_bases AATTTCCTCTGAAAATCGTTATACTTTTTACGAATCCGATTTCGAATTACGTGCCCCAGGTACGTTATAAATCGAGCCTT TGAACCAATTCATTTCCCTT
Product: hydrolase or acyltransferase
Products: NA
Alternate protein names: Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold; Alpha/Beta Fold Family Hydrolase/Acetyltransferase; Hydrolase/Acyltransferase; Polyhydroxyalkanoic Acid Synthase PhaC Subunit; Lipase; Esterase/Lipase
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MIAILKNRRSPFYLATTFFILLFFALFASTLAFLFTGILILILIIHPLLLNWIGKLYGQEDIADEVHFAKTKDGWNIALH RHIPPQQNPQLAPVLVVHGIATNKFMVDLDRRHSLPYYLKLRGYDVFAVSLRGCGRSYHESPTRYEDFTFDDIVKYDIPA MFEKVKKITGSERVSYVGHSMGAMILYSHFCMSERKKDTEDIAAFVSLGGPGNLNHIGITLIGLLSRFPRARKMLDLKFG ASILAPLAGELYTPIDEILYNPKVTSSKTVKKIMKNAIENIADGVTEQFMHWIETKRMHSLNGFYDYIRLQKNISVPALF IAGEKDVIATPEAVHSVYENASSKKKEFRVISKANGSSDDYGHACLVMGDRAEDDVFQYVESFLKKHGLRSQPGIMTKIK EGILSAFRR
Sequences:
>Translated_409_residues MIAILKNRRSPFYLATTFFILLFFALFASTLAFLFTGILILILIIHPLLLNWIGKLYGQEDIADEVHFAKTKDGWNIALH RHIPPQQNPQLAPVLVVHGIATNKFMVDLDRRHSLPYYLKLRGYDVFAVSLRGCGRSYHESPTRYEDFTFDDIVKYDIPA MFEKVKKITGSERVSYVGHSMGAMILYSHFCMSERKKDTEDIAAFVSLGGPGNLNHIGITLIGLLSRFPRARKMLDLKFG ASILAPLAGELYTPIDEILYNPKVTSSKTVKKIMKNAIENIADGVTEQFMHWIETKRMHSLNGFYDYIRLQKNISVPALF IAGEKDVIATPEAVHSVYENASSKKKEFRVISKANGSSDDYGHACLVMGDRAEDDVFQYVESFLKKHGLRSQPGIMTKIK EGILSAFRR >Mature_409_residues MIAILKNRRSPFYLATTFFILLFFALFASTLAFLFTGILILILIIHPLLLNWIGKLYGQEDIADEVHFAKTKDGWNIALH RHIPPQQNPQLAPVLVVHGIATNKFMVDLDRRHSLPYYLKLRGYDVFAVSLRGCGRSYHESPTRYEDFTFDDIVKYDIPA MFEKVKKITGSERVSYVGHSMGAMILYSHFCMSERKKDTEDIAAFVSLGGPGNLNHIGITLIGLLSRFPRARKMLDLKFG ASILAPLAGELYTPIDEILYNPKVTSSKTVKKIMKNAIENIADGVTEQFMHWIETKRMHSLNGFYDYIRLQKNISVPALF IAGEKDVIATPEAVHSVYENASSKKKEFRVISKANGSSDDYGHACLVMGDRAEDDVFQYVESFLKKHGLRSQPGIMTKIK EGILSAFRR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17561046, Length=176, Percent_Identity=29.5454545454545, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17561400, Length=358, Percent_Identity=24.0223463687151, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17566024, Length=171, Percent_Identity=28.6549707602339, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI133930915, Length=185, Percent_Identity=29.1891891891892, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322709, Length=363, Percent_Identity=24.5179063360882, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI24583485, Length=137, Percent_Identity=34.3065693430657, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI116007312, Length=129, Percent_Identity=34.1085271317829, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI19921102, Length=371, Percent_Identity=23.1805929919137, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI24583491, Length=161, Percent_Identity=34.1614906832298, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI62471764, Length=218, Percent_Identity=28.4403669724771, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI19921104, Length=153, Percent_Identity=34.640522875817, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24583480, Length=234, Percent_Identity=28.6324786324786, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24583482, Length=153, Percent_Identity=33.9869281045752, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI17975516, Length=137, Percent_Identity=32.8467153284672, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46322; Mature: 46322
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAILKNRRSPFYLATTFFILLFFALFASTLAFLFTGILILILIIHPLLLNWIGKLYGQE CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DIADEVHFAKTKDGWNIALHRHIPPQQNPQLAPVLVVHGIATNKFMVDLDRRHSLPYYLK HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEHHCCCCCEEEE LRGYDVFAVSLRGCGRSYHESPTRYEDFTFDDIVKYDIPAMFEKVKKITGSERVSYVGHS EECCEEEEEEEHHCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHH MGAMILYSHFCMSERKKDTEDIAAFVSLGGPGNLNHIGITLIGLLSRFPRARKMLDLKFG HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHH ASILAPLAGELYTPIDEILYNPKVTSSKTVKKIMKNAIENIADGVTEQFMHWIETKRMHS HHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNGFYDYIRLQKNISVPALFIAGEKDVIATPEAVHSVYENASSKKKEFRVISKANGSSDD HHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC YGHACLVMGDRAEDDVFQYVESFLKKHGLRSQPGIMTKIKEGILSAFRR CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MIAILKNRRSPFYLATTFFILLFFALFASTLAFLFTGILILILIIHPLLLNWIGKLYGQE CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DIADEVHFAKTKDGWNIALHRHIPPQQNPQLAPVLVVHGIATNKFMVDLDRRHSLPYYLK HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEHHCCCCCEEEE LRGYDVFAVSLRGCGRSYHESPTRYEDFTFDDIVKYDIPAMFEKVKKITGSERVSYVGHS EECCEEEEEEEHHCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHH MGAMILYSHFCMSERKKDTEDIAAFVSLGGPGNLNHIGITLIGLLSRFPRARKMLDLKFG HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHH ASILAPLAGELYTPIDEILYNPKVTSSKTVKKIMKNAIENIADGVTEQFMHWIETKRMHS HHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNGFYDYIRLQKNISVPALFIAGEKDVIATPEAVHSVYENASSKKKEFRVISKANGSSDD HHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC YGHACLVMGDRAEDDVFQYVESFLKKHGLRSQPGIMTKIKEGILSAFRR CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA