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The map label for this gene is ompL1

Identifier: 116329090

GI number: 116329090

Start: 2975092

End: 2976054

Strand: Direct

Name: ompL1

Synonym: LBL_2510

Alternate gene names: NA

Gene position: 2975092-2976054 (Clockwise)

Preceding gene: 116329089

Following gene: 116329095

Centisome position: 82.31

GC content: 42.99

Gene sequence:

>963_bases
ATGATTCGTAACATGAGTAAGGTGTTGTTTGCCCTAGCTGTGGTGTTTTCTTCGGCTGAGAGTCTTAGTGCAAAATCATA
CGCAATTGTAGGATTCGGGTTACAATTAGACCTGGGCCAATTAGGTGGAACAATTACTAAGGATGGTTTGGACGCTGCGA
CCTACTATGGTCCGGTTAGATCAACCAATACTTGTACCGTAAACGCAAATGATCCTACCTGTGTTCAAAACCCTTCTAAA
CCGGCGGGTGAAGGAAATTACGTAGGGGTCGGAACAAGAAGAGCAATTGCCGCTGAAAACCGACTGATTACCCTTGATAG
AACAACAGGCGGCATCATCAATGCAAGATCTACCAAAGGTGCAATGGTCGGCGGAAACCTAATGGTAGGTTACGAGTCTG
ATTTTGGAAAATATTTCTTTTGGAGAGTTGCGGCAGAATATACGCAGAAAATCTCAGGTGGTATTACAAAGGCTGATATT
GCAGGTCTTAATATTGTCGATATGACTTGGGGATTCAGTGCTATTGTAATTCCCGCTACCGTAGGTATCAAATTGAATGT
TACCGAAGATGCCGCGGTTTATATGGGTGCCGGTTTGAACTACTTCAACGGTGGATGGTCTTTGAATGGAATGAACAACA
TCAAAGGTGGTCATGATATTTTAGCCGCTGCCGGAGTTACGAGCATTGCAAACTTATTAGCCGATGGAACCGATCCAATT
ACTACTCGAGAACATATTCGATTCAGAGCCACTGGAATCGCTCCGAATTTTTTAATCGGAACTCAAGCAAGAGTAACTGA
CAAAGGTCACGTATTTTTAGAACTAGAAACGATAATGTCTGCGGCTTATTCAGTCGGTAAAACGCAATCCATAGGAGGAG
CTTCTACTCTTGCTCCTTTTCCTACTTATCCGATCGTTGTCGGTGGGCAAATTTATAGATTTGGCTATAAATACGAACTC
TAA

Upstream 100 bases:

>100_bases
TTCTAAAGTTTCATCCTGTGTCCGGGATTCGGAAACCAAATACAAAAGCTTCCGGAAACACAATTAAATTCTAACTGAAT
CGTGAGTTAAGGAGTTATCA

Downstream 100 bases:

>100_bases
AAAATAGAATTTATAAGATTCCATTTCCAAGAGGCTCTCTTCTTTGAGAGCCTTTTTTTACATACTTCTTTTTTTACTAA
ACCCCACACAATTCACTTCG

Product: OmpL1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MIRNMSKVLFALAVVFSSAESLSAKSYAIVGFGLQLDLGQLGGTITKDGLDAATYYGPVRSTNTCTVNANDPTCVQNPSK
PAGEGNYVGVGTRRAIAAENRLITLDRTTGGIINARSTKGAMVGGNLMVGYESDFGKYFFWRVAAEYTQKISGGITKADI
AGLNIVDMTWGFSAIVIPATVGIKLNVTEDAAVYMGAGLNYFNGGWSLNGMNNIKGGHDILAAAGVTSIANLLADGTDPI
TTREHIRFRATGIAPNFLIGTQARVTDKGHVFLELETIMSAAYSVGKTQSIGGASTLAPFPTYPIVVGGQIYRFGYKYEL

Sequences:

>Translated_320_residues
MIRNMSKVLFALAVVFSSAESLSAKSYAIVGFGLQLDLGQLGGTITKDGLDAATYYGPVRSTNTCTVNANDPTCVQNPSK
PAGEGNYVGVGTRRAIAAENRLITLDRTTGGIINARSTKGAMVGGNLMVGYESDFGKYFFWRVAAEYTQKISGGITKADI
AGLNIVDMTWGFSAIVIPATVGIKLNVTEDAAVYMGAGLNYFNGGWSLNGMNNIKGGHDILAAAGVTSIANLLADGTDPI
TTREHIRFRATGIAPNFLIGTQARVTDKGHVFLELETIMSAAYSVGKTQSIGGASTLAPFPTYPIVVGGQIYRFGYKYEL
>Mature_320_residues
MIRNMSKVLFALAVVFSSAESLSAKSYAIVGFGLQLDLGQLGGTITKDGLDAATYYGPVRSTNTCTVNANDPTCVQNPSK
PAGEGNYVGVGTRRAIAAENRLITLDRTTGGIINARSTKGAMVGGNLMVGYESDFGKYFFWRVAAEYTQKISGGITKADI
AGLNIVDMTWGFSAIVIPATVGIKLNVTEDAAVYMGAGLNYFNGGWSLNGMNNIKGGHDILAAAGVTSIANLLADGTDPI
TTREHIRFRATGIAPNFLIGTQARVTDKGHVFLELETIMSAAYSVGKTQSIGGASTLAPFPTYPIVVGGQIYRFGYKYEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33785; Mature: 33785

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRNMSKVLFALAVVFSSAESLSAKSYAIVGFGLQLDLGQLGGTITKDGLDAATYYGPVR
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEHHHHCCEEECCCCCHHHEECCCC
STNTCTVNANDPTCVQNPSKPAGEGNYVGVGTRRAIAAENRLITLDRTTGGIINARSTKG
CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCEEEECCCEEEEEECCCCCEEEECCCCC
AMVGGNLMVGYESDFGKYFFWRVAAEYTQKISGGITKADIAGLNIVDMTWGFSAIVIPAT
EEECCEEEEEEECCCCCEEEHHHHHHHHHHHHCCCEEHHCCCCEEEEECCCCEEEEEEEE
VGIKLNVTEDAAVYMGAGLNYFNGGWSLNGMNNIKGGHDILAAAGVTSIANLLADGTDPI
EEEEEEECCCCEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
TTREHIRFRATGIAPNFLIGTQARVTDKGHVFLELETIMSAAYSVGKTQSIGGASTLAPF
CCCCCEEEEEECCCCCEEECCCEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCC
PTYPIVVGGQIYRFGYKYEL
CCCCEEECCEEEEEEEEECC
>Mature Secondary Structure
MIRNMSKVLFALAVVFSSAESLSAKSYAIVGFGLQLDLGQLGGTITKDGLDAATYYGPVR
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEHHHHCCEEECCCCCHHHEECCCC
STNTCTVNANDPTCVQNPSKPAGEGNYVGVGTRRAIAAENRLITLDRTTGGIINARSTKG
CCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCEEEECCCEEEEEECCCCCEEEECCCCC
AMVGGNLMVGYESDFGKYFFWRVAAEYTQKISGGITKADIAGLNIVDMTWGFSAIVIPAT
EEECCEEEEEEECCCCCEEEHHHHHHHHHHHHCCCEEHHCCCCEEEEECCCCEEEEEEEE
VGIKLNVTEDAAVYMGAGLNYFNGGWSLNGMNNIKGGHDILAAAGVTSIANLLADGTDPI
EEEEEEECCCCEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
TTREHIRFRATGIAPNFLIGTQARVTDKGHVFLELETIMSAAYSVGKTQSIGGASTLAPF
CCCCCEEEEEECCCCCEEECCCEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCC
PTYPIVVGGQIYRFGYKYEL
CCCCEEECCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA