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The map label for this gene is dedA [H]

Identifier: 116329084

GI number: 116329084

Start: 2961872

End: 2962516

Strand: Reverse

Name: dedA [H]

Synonym: LBL_2501

Alternate gene names: 116329084

Gene position: 2962516-2961872 (Counterclockwise)

Preceding gene: 116329085

Following gene: 116329083

Centisome position: 81.96

GC content: 36.74

Gene sequence:

>645_bases
TTGGAAACTCTTCAGTTTTTTCTCGATCTCTTTTTAAATTTGGAAACACATTTGGATACGATCATTCAGACGTATCAAAA
CGGGACTTACGTTATCCTATTCTTGATCATTTTCGCCGAAACCGGTTTGGTCGTAACACCTTTTCTTCCCGGAGATTCCC
TACTTTTTGCCGTCGGAGCGTTTATTGCGAGAGGTTCTCTGGGTTTAGAAAGTACATTAATTCTTCTCATAATTGCCGCG
ATTTTAGGGGATACCGTAAATTATTCGGTCGGAAATTTTATCGGAGAAAAGATATTAGAAAAAGAAAAAATACCCATGAT
CAAAAAGGAACATTTGGAAAAGGCACATCGGTTTTACGAGACTTACGGAGGAAAAACAATCATTATTGCAAGATTCATTC
CGATCATACGCACTTTCGCTCCTTTTGTCGCTGGAATCGGGACGATGACATACGTTAAATTTATTGCATATAATGCCATA
GGCGGAATTCTATGGATCCTTATTTTCATACTGGGCGGGTATTATTTCGGGAATTTGGAATTCGTAAAAAGAAATTTTAA
AATTGTAATATTTGCGATTATTATTATCTCTGTCATGCCTGCAGTGATCGAATACTTGAAGGAAAGAAAAAAAAGTCGAG
TTTAA

Upstream 100 bases:

>100_bases
TTTTTAGGGTTTTACACGTTTGACTTACCCGCTCCCGGATAAATCCTATCCTAAATTCAATTCACAATAGGACCTCGTTC
TTTCGAACAAGGGAGGCAAT

Downstream 100 bases:

>100_bases
ATTTTTTCGATTCAAAAAAGCTCGCTGGGATGTTGTCAAAAGATGAACTTAAGAGAAAGTTTTATTTCAAAATTCGCGGC
GAGTTTCGTAAAACCAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
METLQFFLDLFLNLETHLDTIIQTYQNGTYVILFLIIFAETGLVVTPFLPGDSLLFAVGAFIARGSLGLESTLILLIIAA
ILGDTVNYSVGNFIGEKILEKEKIPMIKKEHLEKAHRFYETYGGKTIIIARFIPIIRTFAPFVAGIGTMTYVKFIAYNAI
GGILWILIFILGGYYFGNLEFVKRNFKIVIFAIIIISVMPAVIEYLKERKKSRV

Sequences:

>Translated_214_residues
METLQFFLDLFLNLETHLDTIIQTYQNGTYVILFLIIFAETGLVVTPFLPGDSLLFAVGAFIARGSLGLESTLILLIIAA
ILGDTVNYSVGNFIGEKILEKEKIPMIKKEHLEKAHRFYETYGGKTIIIARFIPIIRTFAPFVAGIGTMTYVKFIAYNAI
GGILWILIFILGGYYFGNLEFVKRNFKIVIFAIIIISVMPAVIEYLKERKKSRV
>Mature_214_residues
METLQFFLDLFLNLETHLDTIIQTYQNGTYVILFLIIFAETGLVVTPFLPGDSLLFAVGAFIARGSLGLESTLILLIIAA
ILGDTVNYSVGNFIGEKILEKEKIPMIKKEHLEKAHRFYETYGGKTIIIARFIPIIRTFAPFVAGIGTMTYVKFIAYNAI
GGILWILIFILGGYYFGNLEFVKRNFKIVIFAIIIISVMPAVIEYLKERKKSRV

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=210, Percent_Identity=48.5714285714286, Blast_Score=221, Evalue=2e-59,
Organism=Escherichia coli, GI1789481, Length=148, Percent_Identity=37.1621621621622, Blast_Score=113, Evalue=8e-27,
Organism=Escherichia coli, GI1789384, Length=169, Percent_Identity=30.7692307692308, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1786252, Length=148, Percent_Identity=30.4054054054054, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24158; Mature: 24158

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLQFFLDLFLNLETHLDTIIQTYQNGTYVILFLIIFAETGLVVTPFLPGDSLLFAVGA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH
FIARGSLGLESTLILLIIAAILGDTVNYSVGNFIGEKILEKEKIPMIKKEHLEKAHRFYE
HHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TYGGKTIIIARFIPIIRTFAPFVAGIGTMTYVKFIAYNAIGGILWILIFILGGYYFGNLE
HHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FVKRNFKIVIFAIIIISVMPAVIEYLKERKKSRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METLQFFLDLFLNLETHLDTIIQTYQNGTYVILFLIIFAETGLVVTPFLPGDSLLFAVGA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH
FIARGSLGLESTLILLIIAAILGDTVNYSVGNFIGEKILEKEKIPMIKKEHLEKAHRFYE
HHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TYGGKTIIIARFIPIIRTFAPFVAGIGTMTYVKFIAYNAIGGILWILIFILGGYYFGNLE
HHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FVKRNFKIVIFAIIIISVMPAVIEYLKERKKSRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]