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The map label for this gene is 116329075

Identifier: 116329075

GI number: 116329075

Start: 2945465

End: 2946136

Strand: Reverse

Name: 116329075

Synonym: LBL_2488

Alternate gene names: NA

Gene position: 2946136-2945465 (Counterclockwise)

Preceding gene: 116329076

Following gene: 116329074

Centisome position: 81.51

GC content: 39.58

Gene sequence:

>672_bases
ATGAATCTTTCCTCGATTTTAATTTCTTATTTTTATCAATATCCTCACGCGATGTTCATCACGAACCGGTGCGGTATGAT
TGAGTACATCAACCCCGTTTTTGAAACTATTTCCGGCTATAACCGAAACGAGTTGATCGGGAAGAATCCAAGATTATTTC
AAGCGGGTGTTCATGACCCGAATTTTTATGAAGAATTATGGAAAACTATTCTTTCCGGAAAAGAATACGAAGGAAATTTT
TTAAACCGAAATGGATCAGGGGAAACAATTTCCTGGAAAGAAAGAATCACACCTCTTCGGGACGAAATGGGAAACATTTC
GAATTTCCTGTGTAAAGTGGACATTCCTTCGAAAGATGAGAAAGTAACGAACACATCCGAAGAGAATTCTATTTCTGCAA
ATGGTGGCCTGAGCGAAAAAGCCAGAGAACTACTTTTTTCTCAACTTCAAAAAGATTACGGTCTAACATGCCAAGAAGCG
AAGATCTGCGAGCGTTTAGTCGCAGGTCAAACAAGGGCCTCTCTGATTCAACAACTCGGAGTACATTCAGGAACTCTAAA
GAATCATCTCAAGGCGATTTACAGAAAGACGATTGAAAAAGATTTAGCCCAGCCGGGCCAAGGAAGAGATAAATTACAAA
GACTCACTATGTTTTTGATTCGTCTTTGCTGA

Upstream 100 bases:

>100_bases
TTTATAGCGGTTCAATATAAAGAAGAATCGTTTATTCCTTAAGAGATAGGGAGGGATCTATGTCTACCATGAAAATCAAA
ATTGAGGAGGTAAAAAAAAT

Downstream 100 bases:

>100_bases
TATAGAAATTAAGAACGCAAAGGATCGCACAAAGACAAAGGATTTTGATCCTTTGCGTTTCAATGTTTTCCCAAAATCTT
TTCCAAAGAAAACCTGCCTT

Product: Signal transduction protein

Products: NA

Alternate protein names: Multi-Sensor Hybrid Histidine Kinase; Diguanylate Cyclase With PAS/PAC Sensor; Multi-Sensor Signal Transduction Histidine Kinase; Signal-Transducing Histidine Kinase; Sensory Box Protein; PAS/PAC Sensor Protein; PAS Sensor Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Signal Transduction Protein; Signal Transduction Histidine Kinase; Sensory Box/GGDEF Family Protein; Diguanylate Cyclase With Pas/Pac Sensor; Sensor Histidine Kinase; Diguanylate Cyclase; PAS Fold Family; Signaling Protein; Sensory Box Histidine Kinase/Response Regulator Protein; Hybrid Sensor And Regulator; GGDEF Domain-Containing Protein; Diguanylate Cyclase/Phosphodiesterase With PAS/PAC Sensor; Signal-Transducing Histidine Kinase/Response Regulator; Regulatory Components Of Sensory Transduction System; GGDEF/PAS/PAC-Domain-Containing Protein; Multidomain Fusion Protein; Response Regulator; PAS/PAC Domain-Containing Protein; Pas/Pac Sensor Hybrid Histidine Kinase; Two-Component Sensor Histidine Kinase; C-Like Stage II Sporulation E; Signal-Transducing Histidine Kinase-Like; Hybrid Sensor And Regulator Protein; Sensory Box Histidine Kinase/Response Regulator; GGDEF Domain/Pas/Pac Sensor Domain Protein; Sensory Box-Containing Diguanylate Cyclase; Hybrid Sensory Kinase; FOG EAL Domain-Containing Protein; Sensory Box/Response Regulator; Diguanylate Cyclase Domain Protein; Sensor Histidine Kinase Response Regulator Lipoprotein; Sensory Box GGDEF/EAL Domain-Containing Protein; EAL And GGDEF Domain-Containing Protein; PAS GGDEF And EAL Domain-Containing Protein; PAS/PAC/GGDEF-Domain-Containing Protein; PAS Domain S-Box; PAS Fold Family Protein; Diguanylate Cyclase With PAS/PAC And GAF Sensors; GGDEF/EAL/PAC/PAS-Domain-Containing Protein; Signal Transduction Domain Protein; Oxygen And Light Sensing His Kinase; Histidine Kinase Hybrid

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNLSSILISYFYQYPHAMFITNRCGMIEYINPVFETISGYNRNELIGKNPRLFQAGVHDPNFYEELWKTILSGKEYEGNF
LNRNGSGETISWKERITPLRDEMGNISNFLCKVDIPSKDEKVTNTSEENSISANGGLSEKARELLFSQLQKDYGLTCQEA
KICERLVAGQTRASLIQQLGVHSGTLKNHLKAIYRKTIEKDLAQPGQGRDKLQRLTMFLIRLC

Sequences:

>Translated_223_residues
MNLSSILISYFYQYPHAMFITNRCGMIEYINPVFETISGYNRNELIGKNPRLFQAGVHDPNFYEELWKTILSGKEYEGNF
LNRNGSGETISWKERITPLRDEMGNISNFLCKVDIPSKDEKVTNTSEENSISANGGLSEKARELLFSQLQKDYGLTCQEA
KICERLVAGQTRASLIQQLGVHSGTLKNHLKAIYRKTIEKDLAQPGQGRDKLQRLTMFLIRLC
>Mature_223_residues
MNLSSILISYFYQYPHAMFITNRCGMIEYINPVFETISGYNRNELIGKNPRLFQAGVHDPNFYEELWKTILSGKEYEGNF
LNRNGSGETISWKERITPLRDEMGNISNFLCKVDIPSKDEKVTNTSEENSISANGGLSEKARELLFSQLQKDYGLTCQEA
KICERLVAGQTRASLIQQLGVHSGTLKNHLKAIYRKTIEKDLAQPGQGRDKLQRLTMFLIRLC

Specific function: Unknown

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25465; Mature: 25465

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSSILISYFYQYPHAMFITNRCGMIEYINPVFETISGYNRNELIGKNPRLFQAGVHDP
CCHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCC
NFYEELWKTILSGKEYEGNFLNRNGSGETISWKERITPLRDEMGNISNFLCKVDIPSKDE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHCCHHHHHHCCHHHHEEECCCCCCCC
KVTNTSEENSISANGGLSEKARELLFSQLQKDYGLTCQEAKICERLVAGQTRASLIQQLG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHC
VHSGTLKNHLKAIYRKTIEKDLAQPGQGRDKLQRLTMFLIRLC
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNLSSILISYFYQYPHAMFITNRCGMIEYINPVFETISGYNRNELIGKNPRLFQAGVHDP
CCHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCC
NFYEELWKTILSGKEYEGNFLNRNGSGETISWKERITPLRDEMGNISNFLCKVDIPSKDE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHCCHHHHHHCCHHHHEEECCCCCCCC
KVTNTSEENSISANGGLSEKARELLFSQLQKDYGLTCQEAKICERLVAGQTRASLIQQLG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHC
VHSGTLKNHLKAIYRKTIEKDLAQPGQGRDKLQRLTMFLIRLC
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA