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The map label for this gene is 116329072

Identifier: 116329072

GI number: 116329072

Start: 2941245

End: 2941775

Strand: Reverse

Name: 116329072

Synonym: LBL_2484

Alternate gene names: NA

Gene position: 2941775-2941245 (Counterclockwise)

Preceding gene: 116329074

Following gene: 116329069

Centisome position: 81.39

GC content: 42.94

Gene sequence:

>531_bases
ATGATCGAAAAACGAATCAACAAATTCGGGGAAAACGGAACTTTCGCAACGAAGACCATCCCCAAGGGAACCTTGCTGTT
CAGTTACAGCGAGTGGATCGAGGACGAAGAATTTGGATGGAAAGTTCTAACGGTCGACGAAGCTGAATCGCTTCCCGAAG
CCGAAAAGGACATTTTCATGAAATACGGATACGATGTGGACTTCGGGTTAGTGACCGGACCTACCAACGATCAGTATGTC
ATCAATCATTCCAATTTCATGAATCACTCCTGCGATCCGAATATGTGGTACGATCAGGATGACAACATCGTAGCAAAAAG
GGAAATTCAAGCGGGAGAAGAGCTTACCATCGACTACGCGAACTTCATCGTAAACTTCGACCAAACCTTTGAGTGCGGTT
GTGGGTCGTCAAACTGTAGAAAATTTATTCGCAAGGACGATTGGAAACTTCTGATTCATGAATATCAGATGAATTTTCCG
AAATTCATCCAAAAAGAAATCAAAAAGCTTTATGCCAAAATTCCGGTCTAA

Upstream 100 bases:

>100_bases
AAATATTACTCGGATTAAGTATTTTAATTGAAGTTTTTTTTATACCATTCTTGATAGATAAAAATTTTGCCATTGGCAAT
AAACGCAGGGATCTTTCTGC

Downstream 100 bases:

>100_bases
AGAAGTTCAAAACGAAAATATTACTTTCTAACCTTTAGAATCTTTTCCAGGATGCCTATTCTCAGAAGTCCTGGCGAATC
TTCCGACACTGCAGTATTGG

Product: SET family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MIEKRINKFGENGTFATKTIPKGTLLFSYSEWIEDEEFGWKVLTVDEAESLPEAEKDIFMKYGYDVDFGLVTGPTNDQYV
INHSNFMNHSCDPNMWYDQDDNIVAKREIQAGEELTIDYANFIVNFDQTFECGCGSSNCRKFIRKDDWKLLIHEYQMNFP
KFIQKEIKKLYAKIPV

Sequences:

>Translated_176_residues
MIEKRINKFGENGTFATKTIPKGTLLFSYSEWIEDEEFGWKVLTVDEAESLPEAEKDIFMKYGYDVDFGLVTGPTNDQYV
INHSNFMNHSCDPNMWYDQDDNIVAKREIQAGEELTIDYANFIVNFDQTFECGCGSSNCRKFIRKDDWKLLIHEYQMNFP
KFIQKEIKKLYAKIPV
>Mature_176_residues
MIEKRINKFGENGTFATKTIPKGTLLFSYSEWIEDEEFGWKVLTVDEAESLPEAEKDIFMKYGYDVDFGLVTGPTNDQYV
INHSNFMNHSCDPNMWYDQDDNIVAKREIQAGEELTIDYANFIVNFDQTFECGCGSSNCRKFIRKDDWKLLIHEYQMNFP
KFIQKEIKKLYAKIPV

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20631; Mature: 20631

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS50280 SET ; PS50868 POST_SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKRINKFGENGTFATKTIPKGTLLFSYSEWIEDEEFGWKVLTVDEAESLPEAEKDIFM
CCHHHHHHCCCCCCEEEEECCCCEEEEEHHHHCCCCCCCEEEEEECCCCCCCCHHHHHEE
KYGYDVDFGLVTGPTNDQYVINHSNFMNHSCDPNMWYDQDDNIVAKREIQAGEELTIDYA
CCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEH
NFIVNFDQTFECGCGSSNCRKFIRKDDWKLLIHEYQMNFPKFIQKEIKKLYAKIPV
HEEECCCCCEECCCCCHHHHHHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIEKRINKFGENGTFATKTIPKGTLLFSYSEWIEDEEFGWKVLTVDEAESLPEAEKDIFM
CCHHHHHHCCCCCCEEEEECCCCEEEEEHHHHCCCCCCCEEEEEECCCCCCCCHHHHHEE
KYGYDVDFGLVTGPTNDQYVINHSNFMNHSCDPNMWYDQDDNIVAKREIQAGEELTIDYA
CCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEH
NFIVNFDQTFECGCGSSNCRKFIRKDDWKLLIHEYQMNFPKFIQKEIKKLYAKIPV
HEEECCCCCEECCCCCHHHHHHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA