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The map label for this gene is flaB3 [H]

Identifier: 116329047

GI number: 116329047

Start: 2905187

End: 2905870

Strand: Reverse

Name: flaB3 [H]

Synonym: LBL_2453

Alternate gene names: 116329047

Gene position: 2905870-2905187 (Counterclockwise)

Preceding gene: 116329048

Following gene: 116329033

Centisome position: 80.4

GC content: 37.13

Gene sequence:

>684_bases
ATGACTCGTGTTATAAATCGATTTGCTCGATTTTTTTGCTCTATGATTCTGATTAACGCGGGTTATATTTCCTGTTCCCT
TATGGAAAAACGCGTTTCGGAAAAGGATGTTTCATTTACTCAAATTGCGGAAGCGCGTAGCTTTTTACAAAGGTTGGAAA
CACATCTACAAGTAATCACCGAGATTGTACAAAAGAATAGAGTATTGGCCATTCAAAGCGCTCACGGAATTTATGCGGAT
GAAGATAGAAATCAATTGGACTTACAATTTCAGGAATTACTAAAAGAAATCTGTAGAATTCGTGAAAGCGCTAATTTCAA
AAAAAGAACCTTGTTGAATACTGAACATTCCTCTTGGCCGAGGAACATGTCTCTGCAAATCGATCCTTACAGTTCTTCGA
TTCTATTTCCGTTGCCGGAATTAAAGCTTGAAAAATTCGGCATTCTTTCGTGTAGTTCAAAAGATTTCCAAAGCACAATG
GATGTGAAAACGGCAATTTCCGCGAATCGTTCTATCGGTGTTATGGATTATTCTCTCTCGATCTTAAGCTTTGAAAGAAC
CAGAATTGCCGTCTTGTGGGAGCGGTTGGACTATAGCGAACATTTGCAAGAATTATTAAATGAATCTTTTTCAAATGTAG
ATTCCTCGTATCTTCTACAAGAAACTCAAAAAAACTCCAATTGA

Upstream 100 bases:

>100_bases
AAAAGTCAAGACGGATACTGTTGGAGTTTAAAGAGAAATAAAATTGGAAAAAATAATTGTTTCATTTAAGAGAATTGGGT
AAATCACCGAAAGGTCTGGC

Downstream 100 bases:

>100_bases
ATTACCACGTATAAAAAGTCTGTTTATAAATAGCGCGAGTTTGGTGTAACAAATGCGAAAGCGATTATATGTTTTGACTT
GAAACGGCGCCCCTAAGGAA

Product: endoflagellar protein

Products: NA

Alternate protein names: Class B [H]

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTRVINRFARFFCSMILINAGYISCSLMEKRVSEKDVSFTQIAEARSFLQRLETHLQVITEIVQKNRVLAIQSAHGIYAD
EDRNQLDLQFQELLKEICRIRESANFKKRTLLNTEHSSWPRNMSLQIDPYSSSILFPLPELKLEKFGILSCSSKDFQSTM
DVKTAISANRSIGVMDYSLSILSFERTRIAVLWERLDYSEHLQELLNESFSNVDSSYLLQETQKNSN

Sequences:

>Translated_227_residues
MTRVINRFARFFCSMILINAGYISCSLMEKRVSEKDVSFTQIAEARSFLQRLETHLQVITEIVQKNRVLAIQSAHGIYAD
EDRNQLDLQFQELLKEICRIRESANFKKRTLLNTEHSSWPRNMSLQIDPYSSSILFPLPELKLEKFGILSCSSKDFQSTM
DVKTAISANRSIGVMDYSLSILSFERTRIAVLWERLDYSEHLQELLNESFSNVDSSYLLQETQKNSN
>Mature_226_residues
TRVINRFARFFCSMILINAGYISCSLMEKRVSEKDVSFTQIAEARSFLQRLETHLQVITEIVQKNRVLAIQSAHGIYADE
DRNQLDLQFQELLKEICRIRESANFKKRTLLNTEHSSWPRNMSLQIDPYSSSILFPLPELKLEKFGILSCSSKDFQSTMD
VKTAISANRSIGVMDYSLSILSFERTRIAVLWERLDYSEHLQELLNESFSNVDSSYLLQETQKNSN

Specific function: Component of the core of the flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 26321; Mature: 26190

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVINRFARFFCSMILINAGYISCSLMEKRVSEKDVSFTQIAEARSFLQRLETHLQVIT
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
EIVQKNRVLAIQSAHGIYADEDRNQLDLQFQELLKEICRIRESANFKKRTLLNTEHSSWP
HHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC
RNMSLQIDPYSSSILFPLPELKLEKFGILSCSSKDFQSTMDVKTAISANRSIGVMDYSLS
CCCEEEECCCCCCEECCCCCHHHHHCCEECCCCHHHHHHHHHHHHHHCCCCEEEEEHHHH
ILSFERTRIAVLWERLDYSEHLQELLNESFSNVDSSYLLQETQKNSN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TRVINRFARFFCSMILINAGYISCSLMEKRVSEKDVSFTQIAEARSFLQRLETHLQVIT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
EIVQKNRVLAIQSAHGIYADEDRNQLDLQFQELLKEICRIRESANFKKRTLLNTEHSSWP
HHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC
RNMSLQIDPYSSSILFPLPELKLEKFGILSCSSKDFQSTMDVKTAISANRSIGVMDYSLS
CCCEEEECCCCCCEECCCCCHHHHHCCEECCCCHHHHHHHHHHHHHHCCCCEEEEEHHHH
ILSFERTRIAVLWERLDYSEHLQELLNESFSNVDSSYLLQETQKNSN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2187805; 9665876; 3045083 [H]