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The map label for this gene is ybfF [C]

Identifier: 116329045

GI number: 116329045

Start: 2902560

End: 2903264

Strand: Direct

Name: ybfF [C]

Synonym: LBL_2451

Alternate gene names: 116329045

Gene position: 2902560-2903264 (Clockwise)

Preceding gene: 116329044

Following gene: 116329046

Centisome position: 80.3

GC content: 42.84

Gene sequence:

>705_bases
ATGAAAAATCTCGTCGTCATTCCCGCTTACAACGAGGAGAAAACGATTCGCGAAGTTGTCGAACGGGCGTTGACGTATTC
GGACGTTCTCGTTGTCGACGACGCTTCCAAGGATAAAACTCCCGAAATTCTAAAAGTGCTGATTCATGAATATCCGAAGA
GATTGTTTACGATCCGTCACGAAAAGAACACTCATATTCCCGGAGGAATCCAGGATGGAATGAAATTTGCGGTCGAAAAA
AAATACGATTCGGTCGTGACCATGGATGCGGGCCTTTCCCACGATCCGGATAAACTTCCCGAATTCATCAAAGTGGAAGC
TGACCTAGTAATCGGAAGTCGTATAACGACGGTCGGGGTTCCATTTTACAGAAAACTAATATCTTTTATAGCCGCAAAGG
TGATGAATTATTGCATTTCTCCGGGTTTGTTCGACGTATTCGGCTATCGATTGCGGGATTGCACTTCCGGATATAGAAAG
TATTCTAAAAAAGCGTTCACTTGGATTGCTCAAACTGAATTGGAATCGATCGCGTTTGATTTTCACATGGAAGCCCTTTC
GATCGTGGCTAAAAATCAAGGAACGATTCGGGAAATCGGAATTCACTACGTGTTTTCCAACTCTTCTTTCAATCGAAGGG
TTTTAAAACAAGCGATTCAGTTTGCGCTAAAGTTATTAAAAAGAAAACTTGGTCTCGACGGCTAA

Upstream 100 bases:

>100_bases
CGAAAAAATTCGGATTCAACCCTAAATTCAAACCGAGAGAAGGTGTGGAAAGATTGATTCACTGGATCCAAGCGGATAAA
TCCGTATTCGAAGTCAAAAA

Downstream 100 bases:

>100_bases
AAATATGCAAAAAATTGAATCTTTATTTCGAAAAGTCGATTCTCCCCTAAAAGGCCTGATTGTTCTCGTTTCGTTATACG
GCTTCGTAACACTCGCACTT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKNLVVIPAYNEEKTIREVVERALTYSDVLVVDDASKDKTPEILKVLIHEYPKRLFTIRHEKNTHIPGGIQDGMKFAVEK
KYDSVVTMDAGLSHDPDKLPEFIKVEADLVIGSRITTVGVPFYRKLISFIAAKVMNYCISPGLFDVFGYRLRDCTSGYRK
YSKKAFTWIAQTELESIAFDFHMEALSIVAKNQGTIREIGIHYVFSNSSFNRRVLKQAIQFALKLLKRKLGLDG

Sequences:

>Translated_234_residues
MKNLVVIPAYNEEKTIREVVERALTYSDVLVVDDASKDKTPEILKVLIHEYPKRLFTIRHEKNTHIPGGIQDGMKFAVEK
KYDSVVTMDAGLSHDPDKLPEFIKVEADLVIGSRITTVGVPFYRKLISFIAAKVMNYCISPGLFDVFGYRLRDCTSGYRK
YSKKAFTWIAQTELESIAFDFHMEALSIVAKNQGTIREIGIHYVFSNSSFNRRVLKQAIQFALKLLKRKLGLDG
>Mature_234_residues
MKNLVVIPAYNEEKTIREVVERALTYSDVLVVDDASKDKTPEILKVLIHEYPKRLFTIRHEKNTHIPGGIQDGMKFAVEK
KYDSVVTMDAGLSHDPDKLPEFIKVEADLVIGSRITTVGVPFYRKLISFIAAKVMNYCISPGLFDVFGYRLRDCTSGYRK
YSKKAFTWIAQTELESIAFDFHMEALSIVAKNQGTIREIGIHYVFSNSSFNRRVLKQAIQFALKLLKRKLGLDG

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 26669; Mature: 26669

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLVVIPAYNEEKTIREVVERALTYSDVLVVDDASKDKTPEILKVLIHEYPKRLFTIRH
CCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEC
EKNTHIPGGIQDGMKFAVEKKYDSVVTMDAGLSHDPDKLPEFIKVEADLVIGSRITTVGV
CCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHEEECCCHHHCCC
PFYRKLISFIAAKVMNYCISPGLFDVFGYRLRDCTSGYRKYSKKAFTWIAQTELESIAFD
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FHMEALSIVAKNQGTIREIGIHYVFSNSSFNRRVLKQAIQFALKLLKRKLGLDG
HHHHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNLVVIPAYNEEKTIREVVERALTYSDVLVVDDASKDKTPEILKVLIHEYPKRLFTIRH
CCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEC
EKNTHIPGGIQDGMKFAVEKKYDSVVTMDAGLSHDPDKLPEFIKVEADLVIGSRITTVGV
CCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHEEECCCHHHCCC
PFYRKLISFIAAKVMNYCISPGLFDVFGYRLRDCTSGYRKYSKKAFTWIAQTELESIAFD
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FHMEALSIVAKNQGTIREIGIHYVFSNSSFNRRVLKQAIQFALKLLKRKLGLDG
HHHHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]