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The map label for this gene is cbpA [C]

Identifier: 116329025

GI number: 116329025

Start: 2879024

End: 2879740

Strand: Reverse

Name: cbpA [C]

Synonym: LBL_2430

Alternate gene names: 116329025

Gene position: 2879740-2879024 (Counterclockwise)

Preceding gene: 116329026

Following gene: 116329024

Centisome position: 79.67

GC content: 42.4

Gene sequence:

>717_bases
ATGAATGATTCGGGATCTAAAACCGACTTCCCGGATCATTATAGAAATTTGGGTCTTTCTCCGCTCGCATCTATTGAAAA
AGTAAAGTCACGTTATCGAGAATTGGCCAAGATTTTCCATCCCGACAACCGAGAAACGGGATCTTCCGATCTCTTTCAAA
AATTCGCTCACTCTTACCAGATTCTCACACATCCGGTTCGAAGAAAAGAATATGATCTTTGGTATCTTTCCAGACATCCC
GAGATTCTATTTCGGTTTAAAACTTCCCTGGAAGGGCGAAACGACCCGGCAAAAATCAAACGGATACCGAGTACCAGAAT
TTTATACGCGGGGCAAGCGGTGGAATTGGCTAGAAAAGGGTTACTTCGGGCGGGAATGAGAAACAGAGATAGGAGAAAAT
ACTCCGGAATCTATTACGATATTAGAATTCTCTTAACTCCCGAAGAATTAAATTTTCCTCTTTCCGCGACAATTCCTCTG
GTAGTGCGTGTCCTTTGTCCGGATTGTAGAGGCTCCAACGTATTCTGCGATTCCTGTGGTGGAAAAGGTACATATAAAAG
TTTTCGAAATCTCAACTTAGAAGCGGAAGCCGGTAAGTTGTTACCCGGGAAGGTCTACGAGTTGGATCTTGCTAAATTGA
AACCCGAAGGATTCGTCCATTTTAAAAAGAATCGCCTCAAAGTAAAAATTGAACTCCTAGAGGGAGTGAAAAAATAG

Upstream 100 bases:

>100_bases
AAATATTAAAACTGTCGCGGAAGATGTGGAAACCACGCTTAAAGCGGTGGAAAACGGCGGGCCTTATCAGGAGGAGCTTC
CGAAGGATTAAAATTTCTCT

Downstream 100 bases:

>100_bases
GCTTTATGCAGAAGGTGATCCGTTTTCATCCGATTTATAAGGAAAGGATTTGGGGCGGTAGAAAGCTCGGGAGTTTTTCA
GGAAGAAAAATTCCGGAGGG

Product: DnaJ-like protein

Products: NA

Alternate protein names: Chaperone Protein DNAJ

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNDSGSKTDFPDHYRNLGLSPLASIEKVKSRYRELAKIFHPDNRETGSSDLFQKFAHSYQILTHPVRRKEYDLWYLSRHP
EILFRFKTSLEGRNDPAKIKRIPSTRILYAGQAVELARKGLLRAGMRNRDRRKYSGIYYDIRILLTPEELNFPLSATIPL
VVRVLCPDCRGSNVFCDSCGGKGTYKSFRNLNLEAEAGKLLPGKVYELDLAKLKPEGFVHFKKNRLKVKIELLEGVKK

Sequences:

>Translated_238_residues
MNDSGSKTDFPDHYRNLGLSPLASIEKVKSRYRELAKIFHPDNRETGSSDLFQKFAHSYQILTHPVRRKEYDLWYLSRHP
EILFRFKTSLEGRNDPAKIKRIPSTRILYAGQAVELARKGLLRAGMRNRDRRKYSGIYYDIRILLTPEELNFPLSATIPL
VVRVLCPDCRGSNVFCDSCGGKGTYKSFRNLNLEAEAGKLLPGKVYELDLAKLKPEGFVHFKKNRLKVKIELLEGVKK
>Mature_238_residues
MNDSGSKTDFPDHYRNLGLSPLASIEKVKSRYRELAKIFHPDNRETGSSDLFQKFAHSYQILTHPVRRKEYDLWYLSRHP
EILFRFKTSLEGRNDPAKIKRIPSTRILYAGQAVELARKGLLRAGMRNRDRRKYSGIYYDIRILLTPEELNFPLSATIPL
VVRVLCPDCRGSNVFCDSCGGKGTYKSFRNLNLEAEAGKLLPGKVYELDLAKLKPEGFVHFKKNRLKVKIELLEGVKK

Specific function: DNA-Binding Protein That Preferentially Recognizes A Curved DNA Sequence. It Is Probably A Functional Analog Of Dnaj; Displays Overlapping Activities With Dnaj, But Functions Under Different Conditions, Probably Acting As A Molecular Chaperone In An Adapt

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27417; Mature: 27417

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSGSKTDFPDHYRNLGLSPLASIEKVKSRYRELAKIFHPDNRETGSSDLFQKFAHSYQ
CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ILTHPVRRKEYDLWYLSRHPEILFRFKTSLEGRNDPAKIKRIPSTRILYAGQAVELARKG
HHHCHHHCCCCCEEEECCCCEEEEEEECCCCCCCCHHHHEECCCCEEEECCHHHHHHHHH
LLRAGMRNRDRRKYSGIYYDIRILLTPEELNFPLSATIPLVVRVLCPDCRGSNVFCDSCG
HHHHHCCCCCHHHHCCEEEEEEEEEEHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCC
GKGTYKSFRNLNLEAEAGKLLPGKVYELDLAKLKPEGFVHFKKNRLKVKIELLEGVKK
CCCCHHHHHCCCCCCCCCCCCCCCEEEEHHHHCCCCCEEEEECCCEEEEEEHHCCCCC
>Mature Secondary Structure
MNDSGSKTDFPDHYRNLGLSPLASIEKVKSRYRELAKIFHPDNRETGSSDLFQKFAHSYQ
CCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ILTHPVRRKEYDLWYLSRHPEILFRFKTSLEGRNDPAKIKRIPSTRILYAGQAVELARKG
HHHCHHHCCCCCEEEECCCCEEEEEEECCCCCCCCHHHHEECCCCEEEECCHHHHHHHHH
LLRAGMRNRDRRKYSGIYYDIRILLTPEELNFPLSATIPLVVRVLCPDCRGSNVFCDSCG
HHHHHCCCCCHHHHCCEEEEEEEEEEHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCC
GKGTYKSFRNLNLEAEAGKLLPGKVYELDLAKLKPEGFVHFKKNRLKVKIELLEGVKK
CCCCHHHHHCCCCCCCCCCCCCCCEEEEHHHHCCCCCEEEEECCCEEEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA