Click here to switch to the map view.

The map label for this gene is 116329007

Identifier: 116329007

GI number: 116329007

Start: 2859637

End: 2859972

Strand: Reverse

Name: 116329007

Synonym: LBL_2411

Alternate gene names: NA

Gene position: 2859972-2859637 (Counterclockwise)

Preceding gene: 116329008

Following gene: 116329006

Centisome position: 79.13

GC content: 44.05

Gene sequence:

>336_bases
TTGGAAATCAAAACGAAAAAGATTGGTAAACATACTCTGGTGGCGCTCAACGGAAGGCTGGATATTGGGCATTCAGACGA
GGTGGAGGCGAAGTTGCTGGACGATGTTCAGTCCGGACAGGGTGATATTTTGATCAACCTGGAAAATATTTCTTACATTT
CGTCTTCTGGAATCCGTATTTTCGTCGGTATGGTCAGGGAATTAGAAAAGCAGGGAAGAAAATTGAAACTTTGTTGCATT
ACTCCTCCCGTAAAAAAGGTATTCGATGTGGTCGAGCTATTGGATCTGTTTGAAGTCTACGAAACAGAAAGTTCGGCGCT
CGACTCGCTCGCCTAA

Upstream 100 bases:

>100_bases
TTTCCTTAGATGAAATTATAGATATTGGAACTTAAAAATGAGTTGTAAACGAATTCCGAAACCTTAATTTAGGCTTAATT
CTCCAAAAGGAAGCCATTTT

Downstream 100 bases:

>100_bases
AATCCCGGATTGTCTCTCGGGTTTTTATGTCCCGGAAAACGTTCGCTTTCATTTCACTGAAAACACTTTTCTGGATATTG
CCGTTTCTTTTAGCACTCCT

Product: AntiSigma factor antagonist

Products: NA

Alternate protein names: Anti-Sigma-Factor Antagonist; Anti Sigma Factor Antagonist; Antagonist Of Anti-Sigma Factor; Anti-Anti-Sigma Regulatory Factor SpoIIAA; AntiSigma Factor Antagonist; Anti-Anti-Sigma Factor

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MEIKTKKIGKHTLVALNGRLDIGHSDEVEAKLLDDVQSGQGDILINLENISYISSSGIRIFVGMVRELEKQGRKLKLCCI
TPPVKKVFDVVELLDLFEVYETESSALDSLA

Sequences:

>Translated_111_residues
MEIKTKKIGKHTLVALNGRLDIGHSDEVEAKLLDDVQSGQGDILINLENISYISSSGIRIFVGMVRELEKQGRKLKLCCI
TPPVKKVFDVVELLDLFEVYETESSALDSLA
>Mature_111_residues
MEIKTKKIGKHTLVALNGRLDIGHSDEVEAKLLDDVQSGQGDILINLENISYISSSGIRIFVGMVRELEKQGRKLKLCCI
TPPVKKVFDVVELLDLFEVYETESSALDSLA

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12317; Mature: 12317

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKTKKIGKHTLVALNGRLDIGHSDEVEAKLLDDVQSGQGDILINLENISYISSSGIRI
CCCCCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCEEECCCCCHH
FVGMVRELEKQGRKLKLCCITPPVKKVFDVVELLDLFEVYETESSALDSLA
HHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MEIKTKKIGKHTLVALNGRLDIGHSDEVEAKLLDDVQSGQGDILINLENISYISSSGIRI
CCCCCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCEEECCCCCHH
FVGMVRELEKQGRKLKLCCITPPVKKVFDVVELLDLFEVYETESSALDSLA
HHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA