Definition Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence.
Accession NC_008508
Length 3,614,446

Click here to switch to the map view.

The map label for this gene is 116328988

Identifier: 116328988

GI number: 116328988

Start: 2831806

End: 2832198

Strand: Direct

Name: 116328988

Synonym: LBL_2390

Alternate gene names: NA

Gene position: 2831806-2832198 (Clockwise)

Preceding gene: 116328987

Following gene: 116328989

Centisome position: 78.35

GC content: 46.82

Gene sequence:

>393_bases
ATGAATCAGGAAAAAATTAAAACTATCATCTATTGGTTAGCGACCGGCCTTACCGCCGCTAACTACGCATTTGGAGGTTA
TGCATATCTCAATCGCGGACCGGAAGTTATCGCCGGTATGACTCAACTCGGATACCCACTTTATTTTGCAAGTCTTCTCG
GGGTTTGGAAACTCCTCGGCGCAATTGCAATCACAGCTCCCCGTTTTCCTCTTCTCAAAGAATGGGCATACGCCGGAATG
TTTTTCAACCTTACAGCGGCGTCGGTTTCGAACGCGGTCGCCGGAACTGAAATGATCCACGCGATATTTCTTCTAATCGC
TCTCGTTTTAGTGGCATTATCTTGGGCTTTGCGACCCGCAGATAGAAGGTTGGAAGGAATTTGGCATATATAA

Upstream 100 bases:

>100_bases
GACGAATACCGGCAGATTTGGGAAGCCGGATTGGACCGTCTGGACAAGTATTTACAAGAATTTCAAAAAATGCAAACAAA
CCAAGGAAGGAAAACAGACT

Downstream 100 bases:

>100_bases
GAGAAATCAGATTTACTAATATTCCTACCCGCTTTTTTGAAACGAATCAATCATTCCACTTTCTGAATCGAAAGTGGAAT
GACGCAGAGCTTACGACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MNQEKIKTIIYWLATGLTAANYAFGGYAYLNRGPEVIAGMTQLGYPLYFASLLGVWKLLGAIAITAPRFPLLKEWAYAGM
FFNLTAASVSNAVAGTEMIHAIFLLIALVLVALSWALRPADRRLEGIWHI

Sequences:

>Translated_130_residues
MNQEKIKTIIYWLATGLTAANYAFGGYAYLNRGPEVIAGMTQLGYPLYFASLLGVWKLLGAIAITAPRFPLLKEWAYAGM
FFNLTAASVSNAVAGTEMIHAIFLLIALVLVALSWALRPADRRLEGIWHI
>Mature_130_residues
MNQEKIKTIIYWLATGLTAANYAFGGYAYLNRGPEVIAGMTQLGYPLYFASLLGVWKLLGAIAITAPRFPLLKEWAYAGM
FFNLTAASVSNAVAGTEMIHAIFLLIALVLVALSWALRPADRRLEGIWHI

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14306; Mature: 14306

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQEKIKTIIYWLATGLTAANYAFGGYAYLNRGPEVIAGMTQLGYPLYFASLLGVWKLLG
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHH
AIAITAPRFPLLKEWAYAGMFFNLTAASVSNAVAGTEMIHAIFLLIALVLVALSWALRPA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DRRLEGIWHI
HHHHHHCCCC
>Mature Secondary Structure
MNQEKIKTIIYWLATGLTAANYAFGGYAYLNRGPEVIAGMTQLGYPLYFASLLGVWKLLG
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHH
AIAITAPRFPLLKEWAYAGMFFNLTAASVSNAVAGTEMIHAIFLLIALVLVALSWALRPA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
DRRLEGIWHI
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA