Click here to switch to the map view.

The map label for this gene is 116328981

Identifier: 116328981

GI number: 116328981

Start: 2825818

End: 2826510

Strand: Reverse

Name: 116328981

Synonym: LBL_2383

Alternate gene names: NA

Gene position: 2826510-2825818 (Counterclockwise)

Preceding gene: 116328982

Following gene: 116328980

Centisome position: 78.2

GC content: 42.71

Gene sequence:

>693_bases
ATGAAAATTCGTATCGCTCAACCCGTTTGGGATTGGGTCTTGTCCGCGGTTTTTTTAATAGGTTTCCCGGTCGTCGTTTT
ATTGTCGCTCAATTATCCGAATGTGATTTTACAACAAGGAACGGCTCACCGAATTTTTTACTTTCATGTTCCGGTCGCTT
GGGTCGCTCTTTACGGTCCGATTTTTTCTCTCGTTTTCGCGGTTCTTTATCTGATTAGAAAGGAATCCAGATGGGATTTA
CTTTCGTTTTCCGCAAATCAGATCGCTCTTTTGTTTGCAGTGGGTGTGATATTTTCGGGAAGAATTTGGGCGCTCAGCGC
TTGGGGAGTCCCCTGGGATAAAACCGATGCGAGACTTCAATCGTTTACGGTCTTGTTTATTAGTTTGATAGCATATTTCG
TTTTTCGAATGTTGATCGTCGATGCTTCGAAGAAAAAAATATTTTCCGCTTTCTTGAGTATTCTTTGCGCCGTGAACGCC
GTTATTACCTGGGGGGCGATTCGTTGGATGGATAATCCCGGGAATCATCCCGAGTCGATTCTTGGAAAAGGAGGAATGGA
CTCCGATATTCGTCTGACTTTCTGGATAGGAGTTTTTGCGTATCATATTCTATTTTTGATGTTGTTCCGTTTCGCTTATC
GTTTGTCTAAGATCGAAGATCTTCGTGAGAATTTACCGGAAAGAGAAGAGTAA

Upstream 100 bases:

>100_bases
GAATCGGAATTCTACTTTTGGAACTTTCCGGAGACGAACCCTAAAGAATTAAAGAATCTTTCTTGATTCCACCCGACATC
TTGCGAATACTCTATTTCGT

Downstream 100 bases:

>100_bases
AAAACCTTGTCCTCTCAAGATTATAGTCTTTATACGGTTCTTGCGGTCGACGATTCCGAAATAAATCTAAAGTTGATTGT
ACATACCCTCAAACCTTTGG

Product: ABC transporter permease

Products: NA

Alternate protein names: Heme Exporter Protein C; Cytochrome C-Type Biogenesis Protein CcmC; Cytochrome C-Type Biogenesis Protein Heme Exporter Protein; Heme Exporter Protein CcmC; Heme Exporter Membrane Protein; ABC Transporter Permease

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKIRIAQPVWDWVLSAVFLIGFPVVVLLSLNYPNVILQQGTAHRIFYFHVPVAWVALYGPIFSLVFAVLYLIRKESRWDL
LSFSANQIALLFAVGVIFSGRIWALSAWGVPWDKTDARLQSFTVLFISLIAYFVFRMLIVDASKKKIFSAFLSILCAVNA
VITWGAIRWMDNPGNHPESILGKGGMDSDIRLTFWIGVFAYHILFLMLFRFAYRLSKIEDLRENLPEREE

Sequences:

>Translated_230_residues
MKIRIAQPVWDWVLSAVFLIGFPVVVLLSLNYPNVILQQGTAHRIFYFHVPVAWVALYGPIFSLVFAVLYLIRKESRWDL
LSFSANQIALLFAVGVIFSGRIWALSAWGVPWDKTDARLQSFTVLFISLIAYFVFRMLIVDASKKKIFSAFLSILCAVNA
VITWGAIRWMDNPGNHPESILGKGGMDSDIRLTFWIGVFAYHILFLMLFRFAYRLSKIEDLRENLPEREE
>Mature_230_residues
MKIRIAQPVWDWVLSAVFLIGFPVVVLLSLNYPNVILQQGTAHRIFYFHVPVAWVALYGPIFSLVFAVLYLIRKESRWDL
LSFSANQIALLFAVGVIFSGRIWALSAWGVPWDKTDARLQSFTVLFISLIAYFVFRMLIVDASKKKIFSAFLSILCAVNA
VITWGAIRWMDNPGNHPESILGKGGMDSDIRLTFWIGVFAYHILFLMLFRFAYRLSKIEDLRENLPEREE

Specific function: Unknown

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26441; Mature: 26441

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRIAQPVWDWVLSAVFLIGFPVVVLLSLNYPNVILQQGTAHRIFYFHVPVAWVALYGP
CEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCEEEEEEHHHHHHHHHHH
IFSLVFAVLYLIRKESRWDLLSFSANQIALLFAVGVIFSGRIWALSAWGVPWDKTDARLQ
HHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH
SFTVLFISLIAYFVFRMLIVDASKKKIFSAFLSILCAVNAVITWGAIRWMDNPGNHPESI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHH
LGKGGMDSDIRLTFWIGVFAYHILFLMLFRFAYRLSKIEDLRENLPEREE
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIRIAQPVWDWVLSAVFLIGFPVVVLLSLNYPNVILQQGTAHRIFYFHVPVAWVALYGP
CEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCEEEEEEHHHHHHHHHHH
IFSLVFAVLYLIRKESRWDLLSFSANQIALLFAVGVIFSGRIWALSAWGVPWDKTDARLQ
HHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH
SFTVLFISLIAYFVFRMLIVDASKKKIFSAFLSILCAVNAVITWGAIRWMDNPGNHPESI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHH
LGKGGMDSDIRLTFWIGVFAYHILFLMLFRFAYRLSKIEDLRENLPEREE
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA