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The map label for this gene is flaA-1 [H]

Identifier: 116328974

GI number: 116328974

Start: 2819273

End: 2819992

Strand: Reverse

Name: flaA-1 [H]

Synonym: LBL_2376

Alternate gene names: 116328974

Gene position: 2819992-2819273 (Counterclockwise)

Preceding gene: 116328975

Following gene: 116328973

Centisome position: 78.02

GC content: 43.89

Gene sequence:

>720_bases
ATGAGGAAGAAGATCATCTTACTTGCCGGACTGCTCTGCATTCTTGCTGTACCAGGTGTCTATAGCCAGCAGACCGGAAA
TAATCAGGCTGGTGGAAATCAGCAAACAGGGGCTAACCCGGATCCTCTTGAAAAACTCATTCTCGAGAATTTCGAGGAGG
CGGAGGATTGGAGAGCAAAGTCTACGACTCCTCTCGGGGAAACCAAAGTTCTTAAGATGGTTCAAAGAGGTTTGATTAGA
GACGTGTTCGATGAGAACACGGTTCCGGATAACGGAGGAGATCAGATAGAAAAGAACCATATTCTCGGAGTAAAAACCAA
TTACACCGTCAGAGGTTTTGACAGAGTGGAGGTGTTTCCACCGCACGAGTATGTCATAAAAGGAAAAGCTCGTCAACTTT
CCATCTGGGCTCTGGGAAGAAAATTTCGTCATACACTCTTCGCTAAACTGAGAGATTACAGAGGAAATACTCACAACATT
CGTTTAGGAAGATTGGATTATTTTGGCTGGAGAAAACTCACTGCGACGATTCCGGGTTATGTTCCTCAAAGTACACGGTT
CGCTCTTTTGGATAAAAATCTTCACTTCGTATCTATCTTTGTAGTAAGTGATGTCCACGAAGTGGGCGGACAATTTTACT
TTTATGTGGACGATTTGGAAGTTCGTGCCGATAAATCGGATGCGAAGTATCCTGGATCAGAAATTAAGGATAACTGGTGA

Upstream 100 bases:

>100_bases
TTTACGCTTTTCTTTTTGGATCGGAAGGCGTTTTAAGAGTCGGACCTTAAGTCTCTAAAACGATTTTTTACTTTGTATTT
TGTAACCAGGAGAAATTCTC

Downstream 100 bases:

>100_bases
TCTTCTAAAGAAGGAAAACAAATATGAGAAGGTTCATGAACTCGTTCAAAATTACAACTGCTATCACAACCATTCTCGGG
GGAGCGATCTTTCTGGGTCT

Product: endoflagellar filament sheath protein

Products: NA

Alternate protein names: P-H42 [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MRKKIILLAGLLCILAVPGVYSQQTGNNQAGGNQQTGANPDPLEKLILENFEEAEDWRAKSTTPLGETKVLKMVQRGLIR
DVFDENTVPDNGGDQIEKNHILGVKTNYTVRGFDRVEVFPPHEYVIKGKARQLSIWALGRKFRHTLFAKLRDYRGNTHNI
RLGRLDYFGWRKLTATIPGYVPQSTRFALLDKNLHFVSIFVVSDVHEVGGQFYFYVDDLEVRADKSDAKYPGSEIKDNW

Sequences:

>Translated_239_residues
MRKKIILLAGLLCILAVPGVYSQQTGNNQAGGNQQTGANPDPLEKLILENFEEAEDWRAKSTTPLGETKVLKMVQRGLIR
DVFDENTVPDNGGDQIEKNHILGVKTNYTVRGFDRVEVFPPHEYVIKGKARQLSIWALGRKFRHTLFAKLRDYRGNTHNI
RLGRLDYFGWRKLTATIPGYVPQSTRFALLDKNLHFVSIFVVSDVHEVGGQFYFYVDDLEVRADKSDAKYPGSEIKDNW
>Mature_239_residues
MRKKIILLAGLLCILAVPGVYSQQTGNNQAGGNQQTGANPDPLEKLILENFEEAEDWRAKSTTPLGETKVLKMVQRGLIR
DVFDENTVPDNGGDQIEKNHILGVKTNYTVRGFDRVEVFPPHEYVIKGKARQLSIWALGRKFRHTLFAKLRDYRGNTHNI
RLGRLDYFGWRKLTATIPGYVPQSTRFALLDKNLHFVSIFVVSDVHEVGGQFYFYVDDLEVRADKSDAKYPGSEIKDNW

Specific function: Might be part of the flagella (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006714 [H]

Pfam domain/function: PF04620 FlaA [H]

EC number: NA

Molecular weight: Translated: 27210; Mature: 27210

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKIILLAGLLCILAVPGVYSQQTGNNQAGGNQQTGANPDPLEKLILENFEEAEDWRAK
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
STTPLGETKVLKMVQRGLIRDVFDENTVPDNGGDQIEKNHILGVKTNYTVRGFDRVEVFP
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEECCCEEEEEC
PHEYVIKGKARQLSIWALGRKFRHTLFAKLRDYRGNTHNIRLGRLDYFGWRKLTATIPGY
CCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCC
VPQSTRFALLDKNLHFVSIFVVSDVHEVGGQFYFYVDDLEVRADKSDAKYPGSEIKDNW
CCCCCEEEEEECCCEEEEEEEEHHHHHHCCEEEEEEECEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKKIILLAGLLCILAVPGVYSQQTGNNQAGGNQQTGANPDPLEKLILENFEEAEDWRAK
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
STTPLGETKVLKMVQRGLIRDVFDENTVPDNGGDQIEKNHILGVKTNYTVRGFDRVEVFP
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEECCCEEEEEC
PHEYVIKGKARQLSIWALGRKFRHTLFAKLRDYRGNTHNIRLGRLDYFGWRKLTATIPGY
CCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCC
VPQSTRFALLDKNLHFVSIFVVSDVHEVGGQFYFYVDDLEVRADKSDAKYPGSEIKDNW
CCCCCEEEEEECCCEEEEEEEEHHHHHHCCEEEEEEECEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA