Click here to switch to the map view.

The map label for this gene is degS [C]

Identifier: 116328925

GI number: 116328925

Start: 2744078

End: 2744722

Strand: Reverse

Name: degS [C]

Synonym: LBL_2319

Alternate gene names: 116328925

Gene position: 2744722-2744078 (Counterclockwise)

Preceding gene: 116328927

Following gene: 116328924

Centisome position: 75.94

GC content: 39.07

Gene sequence:

>645_bases
ATGGGCTTATATTTTTCGATTTTGAAGTTTTTCGGAGTGATTCTTTATTTCGGGTTATTTTATTTCTCTTGTTTTTCTCC
GATTGCACAAACAAAAGAGACGGAGACGGAAATCGAAAGCAAACAGGAGATTCTTTCCGGAGAACCTGATCATCATTCTT
CTCTTTTGCGCCATCCCAAAAATAAAGTGCGAGTACATCATATTTTTGAAGAAGTCTATCCGAGTTCTTCCGCAAGTTCG
GTTTCGATTCTCGCCGAAAAAACGACCAAATCTAAACTTCTTCATTCTAAGGGCGGGCATTTTCTGGAAAAGGTTTTGAT
TACCCTCGGCTATGGAATCGTTCTCAATCCGCAGGGTTATATTCTTACGAACGCTCATGTAATTGGGACTTACGATCATC
TTTTGGTGAAGTCAAAATCAGGTAAATCCTACGAAGCGGTCATTATCGGTCAGGATAAGAAAATCGATTTAGCGATTTTG
CAAGTTACTCCGGATGAAGATATTATTCCCGTGGAAAAGTTGGATTATTATACTCTCCAAAGGGGAGAAGCGGCGATTCG
AAAATATATCAATGCAAAAATTCAAATCAAAAAGAATCGAGAATCCACTCAGCCAAAATCCAAAAACCGGACTTCCGACT
TGTAA

Upstream 100 bases:

>100_bases
TTACGGTTCCGATTCAATTCTTGACAAAGAGAGATTTATACGAAATCATTTTATCTACATGGATTTTTTTGGAAATCGAG
AATCCAATGAAAATTTCGTT

Downstream 100 bases:

>100_bases
ATCTTCTCGAATTTGTCGGATGAAAACGGAAACTCTTTTCTTGGTGGTCTGGTCTAAAGAGTGAAAACGGAAGGATTCTC
CCTTTCGTTTAAATCCAACT

Product: trypsin-like serine protease

Products: NA

Alternate protein names: Serine Protease

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MGLYFSILKFFGVILYFGLFYFSCFSPIAQTKETETEIESKQEILSGEPDHHSSLLRHPKNKVRVHHIFEEVYPSSSASS
VSILAEKTTKSKLLHSKGGHFLEKVLITLGYGIVLNPQGYILTNAHVIGTYDHLLVKSKSGKSYEAVIIGQDKKIDLAIL
QVTPDEDIIPVEKLDYYTLQRGEAAIRKYINAKIQIKKNRESTQPKSKNRTSDL

Sequences:

>Translated_214_residues
MGLYFSILKFFGVILYFGLFYFSCFSPIAQTKETETEIESKQEILSGEPDHHSSLLRHPKNKVRVHHIFEEVYPSSSASS
VSILAEKTTKSKLLHSKGGHFLEKVLITLGYGIVLNPQGYILTNAHVIGTYDHLLVKSKSGKSYEAVIIGQDKKIDLAIL
QVTPDEDIIPVEKLDYYTLQRGEAAIRKYINAKIQIKKNRESTQPKSKNRTSDL
>Mature_213_residues
GLYFSILKFFGVILYFGLFYFSCFSPIAQTKETETEIESKQEILSGEPDHHSSLLRHPKNKVRVHHIFEEVYPSSSASSV
SILAEKTTKSKLLHSKGGHFLEKVLITLGYGIVLNPQGYILTNAHVIGTYDHLLVKSKSGKSYEAVIIGQDKKIDLAILQ
VTPDEDIIPVEKLDYYTLQRGEAAIRKYINAKIQIKKNRESTQPKSKNRTSDL

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 24186; Mature: 24055

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLYFSILKFFGVILYFGLFYFSCFSPIAQTKETETEIESKQEILSGEPDHHSSLLRHPK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCH
NKVRVHHIFEEVYPSSSASSVSILAEKTTKSKLLHSKGGHFLEKVLITLGYGIVLNPQGY
HHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCE
ILTNAHVIGTYDHLLVKSKSGKSYEAVIIGQDKKIDLAILQVTPDEDIIPVEKLDYYTLQ
EEECCEEEECHHHEEEECCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHHCCHHHHH
RGEAAIRKYINAKIQIKKNRESTQPKSKNRTSDL
CCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GLYFSILKFFGVILYFGLFYFSCFSPIAQTKETETEIESKQEILSGEPDHHSSLLRHPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCH
NKVRVHHIFEEVYPSSSASSVSILAEKTTKSKLLHSKGGHFLEKVLITLGYGIVLNPQGY
HHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCE
ILTNAHVIGTYDHLLVKSKSGKSYEAVIIGQDKKIDLAILQVTPDEDIIPVEKLDYYTLQ
EEECCEEEECHHHEEEECCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHHCCHHHHH
RGEAAIRKYINAKIQIKKNRESTQPKSKNRTSDL
CCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA